Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01927 ATGGAGGGTGGTGGTTCAGAAGAAGAGAAGAGGAAGGAGAAGCCAGCGGAGGTTGAGAACAAGATCAAGCGCAGAATGAAGACTGCTTTTCAGTTGGAAGTTCTGGAGAAAACTTATGTTGGAGAGGCTTACCCTTCAGAAGCAGTGCGAGCTGAGTTATCTGCGAAGCTGGGTCTGTCTGATCGTCAACTGCAAATGTGGTTTTGTCACCGGAGGCTGAAGGATAGGAAATCAGCACCAACAGCGAAGAAGCCCCGAAATGATCACCCGCCTGTGGCACGGGATTCAGTGCCCGTAGGAGAGGGTCTTGAGCAAATGGCAGTGGCTGATGCCATGCATGATTGTGGTTTAGCTTCTGGGTTGAAGCCATTTGGATATTCGGATCCAAGGCAAGTTGTTCCAAATCCTTCGATTTCCTTTCCTAGAAGAGGAGCTGGATTGCCAACAATGGAGAACAATAGTTACTATGAACCACATCAGGCCATCGAGGTGCTGCGAGCAATTACGTTTGTGGAGAGACAGTTGGGTCAGCCATTAAGAGAGGATGGACCAATTCTGGGAATGGAATTTCATTCCTTACCCCCAGGGGCATTTGGTGCCCCAATAGAGGAAGTGACATTGGGACAGCATAGGCATTCTGGAAGCCCTTTCGAGGCAAAAATTTATGATCAACGAAACAAGGGCATTCCAAGGACTCTCCACGAGTATCAGTTTATTCCAGAGCAGCTAACTGTTAGAAATGAGACATTTGACAGAGTTGCCCCCACTATCCATTACAGTTCTCCTGATGGCATTTCACATTCCAGGACTTCACTACCTAGCCAGAAATCTTTGCTTGGTGGGAATGAATCTACACCATATGGATATGGAGTTCAAGATCAGATGCCTGCTTTGAATCATTTGTCTCAGCATGTCAGGCAGAATCATGTTTTGCCTTTTGCTTCTGGACAGATTGAGGGTATTCCACGAAAGAACACATTTGTTGATGTAACAGTTGTTACTCATAGTGGGGTTCACCCAATAACTCTGACTGACACTGCACTAGTGCCATCTGACAACACGGTTATCCATGAGGAGGAACCTTCAAGGTTTCAGAGGAAGCAAATGAATGAAGAAGCTAGAATACGACGTGAACTTGAAGCTCATGAGAAAAGAGTTAGAAAAGAGATTGAAAAACAGGATATTCTAAGGCGAAAGAGGGAAGAGCAAATAAAGAAAGAGATGGAGAGGAATAACCGTGAAAGGCGGAAAGAAGAAGAAAGGTTGTTACGTGAAAGACAGCGAGAGGAGGAGAGGTACCAAAGAGAACAGAGGCGTGATCTGGAGCGTAGGGAGAAGCTTTTACAGAAAGAATCAATGAGAGCTGAGAAACTGAAACAGAAGGAAGAACTACGCAGGGAGAAAGAGGCAGCAAGGATCAAAGCTGCTTATGAGAGAACTCTTGCCCGCAGAATGACCAGAGAATCAATGGGACTTATTGAAGATGAACGTCTGGAACTCATGGAACTAGCTACATTGAAGAAGAGACTTCCTTCGATACTGGCTCTTGATTATGAAACTATGCAAAATCTCGAGTTATATAGAGATGGGCAAACACCATTCCCACCCAAGTCTGTGATGTTTGGCATTCTTTATAAGAAATATGCTAAAACTTTCTGATCACTTCATTTTTAGGTTTGGAGGTTCTTGAATACTTTTGCTGATGTTCTTGGAATATGGTCGTTTACCTTGGATGAACTTATTCAAGCTTTCCATGACTATGATCCAAGGTTGTTAGGTGAAATTCATATTGCTCTTTTGAGATCTATTATGAAAGATATTGAAGATGTTGCAAGAACTCCCTCCACTGGATCAGGAGGTAACCAAAACAATGTTGCCAATTATGGTGGGGGGCATCCTCAAGTAGTTGAAGGGGCATATGTGTGGGGTTTTGATATAAGAAATTGGCAACGGCATTTAAATCCATTAACATGGCCTGAAATTTTGCGGCAGTTTGCTTTGTCAGCTGGATTTGGCCCAAAATTGCAGAGACATAGTGAATTGGTGCATCCTTGTGATAACAATGAGGGTCATGATTGTAAAGACATAATCTCTCATCTGCGCAGTGGAGCTGCAGTAAAAAATGCAGTTGCTATCATGCAAGAGAAGGGATTATCTAAGCCAAGTAGATCAAGACATCACTTGACTCCTGGAACTGTTAAATTTGCTGCATTTCACGTCCTTTCTGTTGAAGGGAGCAATGGCCTCAATATATTGGAAGTTGCAGAGAAAATTCAGAAATCTGGGCTCCGTGATCTTACAACAAGCAAAACTCCAGAGGCTTCTATATCTGCTGCATTGTCTAGAGACACAAAGCTATTTGAAAGGATCGCTCCTTTGACGTATTGTGTACGTCCTGCATATCGAAAGGATCTGTCTGATGCTGAAGCAATTTTTTCAGCTGCCAGGGAAAGAATCAGGGTATTCAAAAGTGGATATATGGATGCTGGTGAAGCAGAAGAGGGGGGAAGAGAAGATGATTCTGAAAATGATGTAGCAGAAGATATTGAAACCGATGATTTAGGAGCTGAAACTAATATAAAAAATGGGGGTTTCAGTTCTGTAGAATTTAATTCAAAAACCGTAATGAGAATTAGAAAGGACACTGGTAAGGTTTCTCAAACACTTGGTTGCTATGACCATGAGAAACTGGATGAGGATATACTGTCAATTGTTTCTGAAGGCATTGATATGCACAAAGGGATTAGTGCCTCTTGTGATATTGCTGTTTGCAGCAATGATGTGTCTAATCCTAATCTTGAAGGTATGGATATTGATGAAAGCATTCCAGATGAGTCGTGGGTACAGGGGTTGATGGAAGGAGAGTACTCTGACCTCAGTGTTGAGGAGCGTCTTAATGCTCTCATTGCTTTGGTTAATGTGGCAATTGAAGGGAACTTAATTCGTGTTACACTTGAGGATCGTCTAGAAGCTGCAAATGCTTTAAAGAAGCAGATGTGGGCAGAAGCACAGCTGGGTAAACGTCGTATCAAAGAGGACTACTTTGTTAAGATGCATCCTGTATCTAATTTCAGCAACAAGAGTGAATCAAATAGTGCATTTCCATCACTTGAGGGCAAACAGAAGCCATTCCTTTCTGTTGATAACAAGAACGACGAGGCTTTATTAACCCCTCTTGGCCAGTGCAACCAGATCAACGAACTACTGGAAAATCCAAATCATATTGAGAGTTCCTCATTTGAAGTTAGCCACCAGCTCCATCGAAGTTCTGCTAACCAAGATAATTATTCTTTTCAACAATTTGGATTTGCTCCTGAAAAATCAAGGTCAAATATAAAATCTTACATTGGTTACTTGGCAGAACAAACCTACATGTATAGGACATTGCCTCTTGGCTTGGATCGCAGACATAACCGATACTGGCAGTTCATTACATCTGCTTCTCCAAATGATCCTGGTTGTGGCAGGATTTTTGTGGAGTTGCATGATGGTTGTTGGAAATTGATTGATTCTGAAAAGGGATTTGATTCCCTATTGGGTTCGTTGGATGTACGTGGGATCAGGGAGTCACACTTGCATATGATGTTGCAAAGTATCGAGATGGCGTTCAAGGAATCTATTAGAAGGAATGTCCATAATGGTGATGCAAGAATGGAGAATGGGGACACTGTCAAGAGGCTCAAGACAGAAGCTTTTGAAGTGGATACGAACAATTATTGTAGTGATATTCACCATCCTACATCTGTGTGCATCGATAATTCAGATGCTTCAGAGGTCTCGACATCTTTTGCAGTTCAGCTTGGAAGAAATGAAGCTGAAAACAGGGATGCTCTTCTGAGATATCAGGACTTTGAGAAATGGATGCTAAATGAATGCCTAAATTCGTCAATATTATGTGCCTTGAAGTTTGGGAAGAGGAGGCGTAGCAAACTGTTGACTGTGTGTGATTCATGTCATGATGTTTATTTCTTTGATAGAATCAAATGCCCTTCCTGCAATAGAACTCTCAATGCTCACGGCAAGGCAAAGATTGACACTGATTATTTTCATGTTTCATCTTATCTTCCTTTGAGAATGAGATTGCTGAAGGTCTTATTGTCAATTGTTGAGGATTCTGTTCCCGAAGAAGCTTTTCACGGTATTTGGACCAACAGTTATAGGAAATCATGGTGTACAAAACTGGATGCTTGCTCATCAACTGAAGACCTCCTGGAGATATTAACTGTATTAGAAAGCGCTATAAAGAGGGAGTATTTGGATTCAAACTATGAAACTACCTCTGAGCTGCTGGGTTCGTTAAATTCTTCTGGATGTCCTCCAACTAATGATTTTGTAGGTGCTGAAAGGATACTTCCATGGGTGCCGTGCACAACAGCTGCGGTGGCTCTGAGACTCATGGAACTCGATGCATGCACCTCTTACACCTTTCAGCAGAAGATGGAGTCTGAAAAGGATAAAAGAATTGGAATTGTTACGAAGCTTCCGACAAAATATGCTTCTGCCAAATCATCCTGCCGTGATAGTGCAATTGAAGAAAGAGGACAAACGTCCCAACAGGGACAAAGATCCCAGCAGGGACAAAGCATGCATAAGGTTAAGCATACTGTTGAAAACATGGTTGGTCTTGGTGCTGGCCTTGCAAGTTACAGCAGAGGACAAAGGTCCCGACAGGGCCGGAGCCATTCTTGTGTGAGTGGGAGATCACAAGGACGGATTCTTAATTCAAGACATGATTCTAGAAAGAGAAGCACGACCTCTAGCAGCATGAAAATAGGAAATTTACTTGGATGGAAAGGGAGACCATGTAGGCATGCAGAACAAAATGTACGTGGTCGTCGGAGTGTTCGAAGTAGGCAGAAACCGGCTGTCAAGGTTGAGAAGGACACTCCAGATGATATCACAGGGTATACAGCTGGTATCTTTATCAATGAAAAGATGAATGGAAGTGAAGTGGAAGCTGCTGCTAGAAGTGCTAGCAGCTCAGAAAAATCGGCCTATGAAAATGATATTTATCAGTCAACAGTTGATGCGGATGAATATCTAATTGATGATAATAATAATGATGGATATGAGGGTGGATTTAGTGGAAAATCTGAGAACTTTGCAGAGGGGAGCAACCGTAATGTGGATGATGATGAAAATGAGGACGTTGATGACAATGATGATGAAGACGGACAAGTTGATGTTGAAGATTATATAAGCCACAAATCAGATACTGACGCCGGAGAAAATGCCGACCAGAACATGGATCCTAATGGAACAGATTCAACTTCATTGGAGTACAGTGATTAA 5292 0.4235 MEGGGSEEEKRKEKPAEVENKIKRRMKTAFQLEVLEKTYVGEAYPSEAVRAELSAKLGLSDRQLQMWFCHRRLKDRKSAPTAKKPRNDHPPVARDSVPVGEGLEQMAVADAMHDCGLASGLKPFGYSDPRQVVPNPSISFPRRGAGLPTMENNSYYEPHQAIEVLRAITFVERQLGQPLREDGPILGMEFHSLPPGAFGAPIEEVTLGQHRHSGSPFEAKIYDQRNKGIPRTLHEYQFIPEQLTVRNETFDRVAPTIHYSSPDGISHSRTSLPSQKSLLGGNESTPYGYGVQDQMPALNHLSQHVRQNHVLPFASGQIEGIPRKNTFVDVTVVTHSGVHPITLTDTALVPSDNTVIHEEEPSRFQRKQMNEEARIRRELEAHEKRVRKEIEKQDILRRKREEQIKKEMERNNRERRKEEERLLRERQREEERYQREQRRDLERREKLLQKESMRAEKLKQKEELRREKEAARIKAAYERTLARRMTRESMGLIEDERLELMELATLKKRLPSILALDYETMQNLELYRDGQTPFPPKSVMFGILYKKYAKTFXSLHFXVWRFLNTFADVLGIWSFTLDELIQAFHDYDPRLLGEIHIALLRSIMKDIEDVARTPSTGSGGNQNNVANYGGGHPQVVEGAYVWGFDIRNWQRHLNPLTWPEILRQFALSAGFGPKLQRHSELVHPCDNNEGHDCKDIISHLRSGAAVKNAVAIMQEKGLSKPSRSRHHLTPGTVKFAAFHVLSVEGSNGLNILEVAEKIQKSGLRDLTTSKTPEASISAALSRDTKLFERIAPLTYCVRPAYRKDLSDAEAIFSAARERIRVFKSGYMDAGEAEEGGREDDSENDVAEDIETDDLGAETNIKNGGFSSVEFNSKTVMRIRKDTGKVSQTLGCYDHEKLDEDILSIVSEGIDMHKGISASCDIAVCSNDVSNPNLEGMDIDESIPDESWVQGLMEGEYSDLSVEERLNALIALVNVAIEGNLIRVTLEDRLEAANALKKQMWAEAQLGKRRIKEDYFVKMHPVSNFSNKSESNSAFPSLEGKQKPFLSVDNKNDEALLTPLGQCNQINELLENPNHIESSSFEVSHQLHRSSANQDNYSFQQFGFAPEKSRSNIKSYIGYLAEQTYMYRTLPLGLDRRHNRYWQFITSASPNDPGCGRIFVELHDGCWKLIDSEKGFDSLLGSLDVRGIRESHLHMMLQSIEMAFKESIRRNVHNGDARMENGDTVKRLKTEAFEVDTNNYCSDIHHPTSVCIDNSDASEVSTSFAVQLGRNEAENRDALLRYQDFEKWMLNECLNSSILCALKFGKRRRSKLLTVCDSCHDVYFFDRIKCPSCNRTLNAHGKAKIDTDYFHVSSYLPLRMRLLKVLLSIVEDSVPEEAFHGIWTNSYRKSWCTKLDACSSTEDLLEILTVLESAIKREYLDSNYETTSELLGSLNSSGCPPTNDFVGAERILPWVPCTTAAVALRLMELDACTSYTFQQKMESEKDKRIGIVTKLPTKYASAKSSCRDSAIEERGQTSQQGQRSQQGQSMHKVKHTVENMVGLGAGLASYSRGQRSRQGRSHSCVSGRSQGRILNSRHDSRKRSTTSSSMKIGNLLGWKGRPCRHAEQNVRGRRSVRSRQKPAVKVEKDTPDDITGYTAGIFINEKMNGSEVEAAARSASSSEKSAYENDIYQSTVDADEYLIDDNNNDGYEGGFSGKSENFAEGSNRNVDDDENEDVDDNDDEDGQVDVEDYISHKSDTDAGENADQNMDPNGTDSTSLEYSD 1763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01927 1763 Pfam DDT domain 558 606 IPR018501 -
Arst3g01927 1763 MobiDBLite consensus disorder prediction 261 282 - -
Arst3g01927 1763 CDD homeodomain 21 78 IPR001356 GO:0003677
Arst3g01927 1763 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 944 982 IPR028942 -
Arst3g01927 1763 MobiDBLite consensus disorder prediction 1729 1743 - -
Arst3g01927 1763 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1127 1199 IPR028941 -
Arst3g01927 1763 SUPERFAMILY Homeodomain-like 19 77 IPR009057 -
Arst3g01927 1763 MobiDBLite consensus disorder prediction 1744 1763 - -
Arst3g01927 1763 MobiDBLite consensus disorder prediction 76 97 - -
Arst3g01927 1763 Coils Coil 365 474 - -
Arst3g01927 1763 ProSiteProfiles DDT domain profile. 550 609 IPR018501 -
Arst3g01927 1763 MobiDBLite consensus disorder prediction 261 291 - -
Arst3g01927 1763 Gene3D - 11 91 - -
Arst3g01927 1763 MobiDBLite consensus disorder prediction 1510 1532 - -
Arst3g01927 1763 MobiDBLite consensus disorder prediction 1550 1572 - -
Arst3g01927 1763 MobiDBLite consensus disorder prediction 1504 1596 - -
Arst3g01927 1763 MobiDBLite consensus disorder prediction 76 91 - -
Arst3g01927 1763 MobiDBLite consensus disorder prediction 1709 1728 - -
Arst3g01927 1763 Pfam Homeodomain 23 77 IPR001356 GO:0003677
Arst3g01927 1763 ProSiteProfiles 'Homeobox' domain profile. 18 78 IPR001356 GO:0003677
Arst3g01927 1763 MobiDBLite consensus disorder prediction 1677 1763 - -
Arst3g01927 1763 ProSiteProfiles HARE-type HTH domain profile. 731 800 IPR007759 GO:0006355
Arst3g01927 1763 SMART HOX_1 20 82 IPR001356 GO:0003677
Arst3g01927 1763 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1763 IPR044977 GO:0006357
Arst3g01927 1763 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1763 IPR044977 GO:0006357
Arst3g01927 1763 SMART testlast3 549 609 IPR018501 -
Arst3g01927 1763 Pfam HB1, ASXL, restriction endonuclease HTH domain 731 798 IPR007759 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01927 Arst-Chr3 22598021 22611137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01927 1 1486 Homeobox Transcription Factor Family AT5G44180 46.895 0.0 1218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Arst3g01927 WSD 4.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01927 - - gmx:100797480 1984.53