Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01926 ATGGGTGTGGATTATTACAAGATCTTGCAGGTTGATAAGAATGCAAAAGATGAAGACTTGAAGAAGGCTTATAGGAAACTTGCCATGAAGTGGCACCCTGATAAGAACCCCAACAACAAAAAAGATGCTGAAGCTAAGTTCAAGCAGATTTCTGAAGCTTACGAGGTTCTTAGTGATCCTCAGAAGAGAGCTATCTATGATCAGTATGGGGAGGAGGGGCTTAAGGGACAGGTACCCCCTCCTGATGCCGGTGGACCTGGTGGAGGTGCTGGAACTACTTTCTTTTCAACCGGAGATTTCCCGGGAGGATCATTTCGGTTCAATCCCCGGAGTGCAGACGACATTTTCGCAGAATTCTTTGGGTTTTCAAGCCCGTTTGGTGGCTCCGGTGGGAGAGGAAGTGGCATGAGGTCGAGAGGATTTTCTAGTGGAATGTTTGGAGATGATATGTTTGGATCCTTTGGTGAAGGAGGAGGGGTGCATGTGAGCCATGGCACGCCTCGCAAGGCGGCTACCATTGAGAACAAGTTGCCCTGTACCCTGGAGGAGATATACAGAGGGACCACCAAGAAGATGAAGATTTCTAGAGAAATTGTGGATGCTAGTGGGAAAACCATGCCGGTAGAGGAGATATTGACCATCAACGTGAAGCCTGGTTGGAAGAAGGGGACGAAGATCACCTTCCCGGAGAAGGGAAACGAACAGGTGAACGTGACGCCAGCAGACCTCGTCTTCGTCATCGAGGAAAAGCCGCACGGCGTCTTCACTCGTGACGGAAACGATCTCATCGTGACGCAGAAGATCACCCTCGTGGAAGCCTTGACCGGTTACACAGTGCGCCTCACCACACTGGATGGCAGAACCTTAAACATACCAATCAACACCGTGATTCATCCCAACTATGAGGAGCTTGTACCGAGAGAAGGCATGCCATTACCAAAGGATCCATCAAAGAAGGGGAACTTGAGAATAAGATTCAACATCAAGTTCCCAACCAGGCTCACTGACGAACAGAAATCAGGAATTAGGAAACTCTTGGCTGCATCAGCATGA 1053 0.491 MGVDYYKILQVDKNAKDEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYEVLSDPQKRAIYDQYGEEGLKGQVPPPDAGGPGGGAGTTFFSTGDFPGGSFRFNPRSADDIFAEFFGFSSPFGGSGGRGSGMRSRGFSSGMFGDDMFGSFGEGGGVHVSHGTPRKAATIENKLPCTLEEIYRGTTKKMKISREIVDASGKTMPVEEILTINVKPGWKKGTKITFPEKGNEQVNVTPADLVFVIEEKPHGVFTRDGNDLIVTQKITLVEALTGYTVRLTTLDGRTLNIPINTVIHPNYEELVPREGMPLPKDPSKKGNLRIRFNIKFPTRLTDEQKSGIRKLLAASA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01926 350 PRINTS DnaJ domain signature 24 39 IPR001623 -
Arst3g01926 350 PRINTS DnaJ domain signature 6 24 IPR001623 -
Arst3g01926 350 PRINTS DnaJ domain signature 42 62 IPR001623 -
Arst3g01926 350 PRINTS DnaJ domain signature 62 81 IPR001623 -
Arst3g01926 350 SUPERFAMILY HSP40/DnaJ peptide-binding domain 174 252 IPR008971 GO:0006457|GO:0051082
Arst3g01926 350 CDD DnaJ_C 171 334 - -
Arst3g01926 350 FunFam DnaJ subfamily B member 13 252 332 - -
Arst3g01926 350 CDD DnaJ 4 59 IPR001623 -
Arst3g01926 350 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 346 - -
Arst3g01926 350 SUPERFAMILY HSP40/DnaJ peptide-binding domain 254 340 IPR008971 GO:0006457|GO:0051082
Arst3g01926 350 SUPERFAMILY Chaperone J-domain 3 104 IPR036869 -
Arst3g01926 350 Gene3D - 252 332 - -
Arst3g01926 350 Pfam DnaJ C terminal domain 173 331 IPR002939 -
Arst3g01926 350 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Arst3g01926 350 Gene3D - 171 250 - -
Arst3g01926 350 FunFam DnaJ subfamily B member 13 3 130 - -
Arst3g01926 350 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Arst3g01926 350 SMART dnaj_3 3 62 IPR001623 -
Arst3g01926 350 MobiDBLite consensus disorder prediction 72 93 - -
Arst3g01926 350 Pfam DnaJ domain 4 67 IPR001623 -
Arst3g01926 350 FunFam Dnaj homolog subfamily b member 169 250 - -
Arst3g01926 350 Gene3D DnaJ domain 3 133 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01926 Arst-Chr3 22595617 22597744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01926 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 2.48e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01926 K09510 - gmx:100778672 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01926 3 22595617 22597744 Arst3g01926 3 22595617 22597744 ECH