Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01923 ATGCTTGGTGTGTCATCACCTCCTGTGGGGAGTACAAGAAGAGATGAAAGAATGGAGAGCTTCAAGTCGATTGGGGTGTCATCAAAAGACGATGGATTTGGCGAACTGTCTGAAGGAAGCTTGTTGGAAAGCATCAATTTTGATGACCTCTTCGTCGGCATCAACATGGAAAGCGATGTGTTGCCAGATTTGGAGATGGAGGCTGATGTCTTTGCCCAATTTTTTGACAACCCTAAGGCAGCGGCAGATCAATCTTCAATTCACAATAAACTTGCTTCCAATAAGAATGAGGAGTCTGTAGTTGTGAATCCTCCTACGAAGAATGCTGGAAAAGGAAGAAAACCATCGTCTCAATCCAAGAGTAATAATCCTCAAGCCAAGATTAGAAAAGTCAAGGTGGATTGGACCCCAGAATTACATAGGAGATTTGTACAAGCCGTGGAACAACTTGGAGTGGATAAGGCAGTACCTTCTAGGATTTTGGAGATTATGGGAATTGATTGCCTCACTCGCCATAACATTGCAAGTCACCTTCAGAAATATAGGTCCCATAGGAAACATTTACTAGCGCGTGAAGCTGAAGCAGCAAATTGGAATCAAAGGAGACAAATGTATGGAGGAGGTATAGCAGGGAAGAGAGATATGAGTAGCCCATGGGTAGCACCTACCATGGGTTTCCCTCCAATCACTTTAATGCACCATTTTAGACCATTACATGTATGGGGTCATCCCTCCATGGACCAATCTTTTATACACACTCCGACTCATTCACTGTCGCGGCCGTGGGTGCAACCTGTTGCTCTCCCGTTCTGGCATCCTCACCACCAACTAGCTCAAAACATGCTAACCCCAGGATCACCGTGTTTTCCACAGCCTCTGACAACAAGGAAATATGGATCAGGAGGTGTGGCAGGCAGTATTCCAGCAACATCACCACATCCACATGTTATGTACAAAGCAGCAGATCCTCCCATTAACGGCCTCTCCAGCCCCAACCCAAACCCCATCATTGACTTCCATCCGTCAAAGGAGAGCATAGATGCAGCTATTGGAGATGTTCTATCAAAGCCATGGCAGCCACTACCTCTTGGACTTAAAGCTCCAGCACTTGACAGTGTTCTAACTGAATTACAAAGACAAGGAATTTCAAATATTCCACCCTCTTGTGCTTGA 1173 0.4544 MLGVSSPPVGSTRRDERMESFKSIGVSSKDDGFGELSEGSLLESINFDDLFVGINMESDVLPDLEMEADVFAQFFDNPKAAADQSSIHNKLASNKNEESVVVNPPTKNAGKGRKPSSQSKSNNPQAKIRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAANWNQRRQMYGGGIAGKRDMSSPWVAPTMGFPPITLMHHFRPLHVWGHPSMDQSFIHTPTHSLSRPWVQPVALPFWHPHHQLAQNMLTPGSPCFPQPLTTRKYGSGGVAGSIPATSPHPHVMYKAADPPINGLSSPNPNPIIDFHPSKESIDAAIGDVLSKPWQPLPLGLKAPALDSVLTELQRQGISNIPPSCA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01923 390 Gene3D - 127 188 - -
Arst3g01923 390 MobiDBLite consensus disorder prediction 91 128 - -
Arst3g01923 390 SUPERFAMILY Homeodomain-like 128 187 IPR009057 -
Arst3g01923 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 127 186 IPR017930 -
Arst3g01923 390 FunFam Two-component response regulator 126 189 - -
Arst3g01923 390 Pfam Myb-like DNA-binding domain 133 182 IPR001005 -
Arst3g01923 390 MobiDBLite consensus disorder prediction 110 126 - -
Arst3g01923 390 MobiDBLite consensus disorder prediction 1 34 - -
Arst3g01923 390 PANTHER TRANSCRIPTION ACTIVATOR GLK1 93 389 IPR044825 GO:0003700|GO:0045893
Arst3g01923 390 NCBIfam myb-like DNA-binding domain, SHAQKYF class 130 184 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01923 Arst-Chr3 22485562 22491750 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01923 1 245 G2-like Transcription Factor Family AT5G44190 45.149 1.79e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst3g01923 Myb_DNA-binding 4.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01923 - - aip:107629821 746.117