Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01922 ATGGAGAGCTTCAAGTCGATTGGGGTGTCATCAAAAGACGATGGATTTGGCGAACTGTCTGAAGGAAGCTTGTTGGAAAGCATCAATTTTGATGACCTCTTCGTCGGCATCAACATGGAAAGCGATGTGTTGCCAGATTTGGAGATGGAGGCTGATGTCTTTGCCCAATTTTTTGACAACCCTAAGGCAGCGGCAGATCAATCTTCAATTCACAATAAACTTGCTTCCAATAAGAATGAGGAGTCTGTAGTTGTGAATCCTCCTACGAAGAATGCTGGAAAAGGAAGAAAACCATCGTCTCAATCCAAGAGTAATAATCCTCAAGCCAAGATTAGAAAAGTCAAGGTGGATTGGACCCCAGAATTACATAGGAGATTTGTACAAGCCGTGGAACAACTTGGAGTGGATAAGGCAGTACCTTCTAGGATTTTGGAGATTATGGGAATTGATTGCCTCACTCGCCATAACATTGCAAGTCACCTTCAGAAATATAGGTCCCATAGGAAACATTTACTAGCGCGTGAAGCTGAAGCAGCAAATTGGAATCAAAGGAGACAAATGTATGGAGGAGGTATAGCAGGGAAGAGAGATATGAGTAGCCCATGGGTAGCACCTACCATGGGTTTCCCTCCAATCACTTTAATGCACCATTTTAGACCATTACATGTATGGGGTCATCCCTCCATGGACCAATCTTTTATACACACTCCGACTCATTCACTGTCGCGGCCGTGGGTGCAACCTGTTGCTCTCCCGTTCTGGCATCCTCACCACCAACTAGCTCAAAACATGCTAACCCCAGGATCACCGTGTTTTCCACAGCCTCTGACAACAAGGAAATATGGATCAGGAGGTGTGGCAGGCAGTATTCCAGCAACATCACCACATCCACATGTTATGTACAAAGCAGCAGATCCTCCCATTAACGGCCTCTCCAGCCCCAACCCAAACCCCATCATTGACTTCCATCCGTCAAAGGAGAGCATAGATGCAGCTATTGGAGATGTTCTATCAAAGCCATGGCAGCCACTACCTCTTGGACTTAAAGCTCCAGCACTTGACAGTGTTCTAACTGAATTACAAAGACAAGGAATTTCAAATATTCCACCCTCTTGTGCTTGA 1122 0.4537 MESFKSIGVSSKDDGFGELSEGSLLESINFDDLFVGINMESDVLPDLEMEADVFAQFFDNPKAAADQSSIHNKLASNKNEESVVVNPPTKNAGKGRKPSSQSKSNNPQAKIRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAANWNQRRQMYGGGIAGKRDMSSPWVAPTMGFPPITLMHHFRPLHVWGHPSMDQSFIHTPTHSLSRPWVQPVALPFWHPHHQLAQNMLTPGSPCFPQPLTTRKYGSGGVAGSIPATSPHPHVMYKAADPPINGLSSPNPNPIIDFHPSKESIDAAIGDVLSKPWQPLPLGLKAPALDSVLTELQRQGISNIPPSCA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01922 373 MobiDBLite consensus disorder prediction 75 112 - -
Arst3g01922 373 MobiDBLite consensus disorder prediction 93 109 - -
Arst3g01922 373 SUPERFAMILY Homeodomain-like 111 170 IPR009057 -
Arst3g01922 373 Gene3D - 110 171 - -
Arst3g01922 373 PANTHER TRANSCRIPTION ACTIVATOR GLK1 76 372 IPR044825 GO:0003700|GO:0045893
Arst3g01922 373 Pfam Myb-like DNA-binding domain 116 165 IPR001005 -
Arst3g01922 373 NCBIfam myb-like DNA-binding domain, SHAQKYF class 113 167 IPR006447 GO:0003677
Arst3g01922 373 FunFam Two-component response regulator 109 172 - -
Arst3g01922 373 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 110 169 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01922 Arst-Chr3 22485562 22491750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01922 17 228 G2-like Transcription Factor Family AT5G44190 47.826 2.13e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst3g01922 Myb_DNA-binding 4.5e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01922 3 22485562 22491750 Arst8g02367 8 32902120 32907102 PCT