Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01899 ATGAAAACCCCACCTTCCATGGCTTTGAAAGAAAAGAAGAAGCCCGCCACAAAAAACAAGATCAACGGCACCGTCATTACCAACGATGGCAACAACACTAACAATAAAGAACTTCATTACAGGGGCGTCCGTAAGAGGCCATGGGGCCGTTACGCCGCCGAGATCAGGGATCCGGGTAAGAAGAGCCGCGTTTGGCTTGGAACATTCGACACCGCCGAAGAAGCTGCCATGGCTTATGACGCTGCCGCAAGACAGTTCCGTGGCTCCAAAGCCAAGACCAACTTCCCACTCGCTTCTTCTTCGCCCTCTCCCAACGAAAACGCCAACCTCAACATCAACAAGAATAATAGCGCCGGCGAGAGTCCTAGCCAGAGCAGCACTGTTGAGTCATCAACACCGGAGCGTGAGGTCACGCGCCGCCGCGACGTCACGGTGATTGAGCGGTTTCCGTTCCTTCCGTTGCAGCAGCCACTTCCGCCGCCGCATCATCAGCTCATGCCGTTTGGCGTTGCCGGCGGTACGGTTGTTGATGGTGTGGTGGCTCCCGTACGGCCGGTTTTCTTTTTAGATCCAACCGTCGGTCGGGCTGAGTTCTTTGGGCAAAGCTTTCCCGTACGGTTCGAACCGGGTCCATACGAGATTAGGACCGGGTTTGGAAGTTCGGCACATAGTGACTCGGATTCTTCCTCCGTCGTTGATTGCCAGCCCAAGAGAGAGCTCAATCTCGATCTCAACCTAGCTCCGCCAATGGATGCTTAA 759 0.5494 MKTPPSMALKEKKKPATKNKINGTVITNDGNNTNNKELHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAMAYDAAARQFRGSKAKTNFPLASSSPSPNENANLNINKNNSAGESPSQSSTVESSTPEREVTRRRDVTVIERFPFLPLQQPLPPPHHQLMPFGVAGGTVVDGVVAPVRPVFFLDPTVGRAEFFGQSFPVRFEPGPYEIRTGFGSSAHSDSDSSSVVDCQPKRELNLDLNLAPPMDA 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01899 252 MobiDBLite consensus disorder prediction 1 37 - -
Arst3g01899 252 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Arst3g01899 252 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Arst3g01899 252 FunFam Ethylene-responsive transcription factor 2 39 97 - -
Arst3g01899 252 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Arst3g01899 252 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Arst3g01899 252 MobiDBLite consensus disorder prediction 20 37 - -
Arst3g01899 252 Gene3D AP2/ERF domain 39 98 IPR036955 GO:0003700|GO:0006355
Arst3g01899 252 MobiDBLite consensus disorder prediction 93 140 - -
Arst3g01899 252 CDD AP2 39 96 IPR001471 GO:0003700|GO:0006355
Arst3g01899 252 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 189 - -
Arst3g01899 252 SUPERFAMILY DNA-binding domain 39 97 IPR016177 GO:0003677
Arst3g01899 252 MobiDBLite consensus disorder prediction 1 18 - -
Arst3g01899 252 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Arst3g01899 252 MobiDBLite consensus disorder prediction 93 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01899 Arst-Chr3 22259511 22260700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01899 32 250 AP2-EREBP Transcription Factor Family AT5G44210 47.748 6.05e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst3g01899 AP2 2.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01899 K09286 - gmx:100801924 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01899 3 22259511 22260700 Arst3g01899 3 22259511 22260700 ECH
Arst10g00316 10 2633582 2634569 Arst3g01899 3 22259511 22260700 ECH
Arst8g02821 8 38643440 38644594 Arst3g01899 3 22259511 22260700 ECH