Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01886 ATGGGTTTGCTTTCATCTTCTTATTCTTCTTCTTTCACCACTTTTGCTCTATTCCTCTTTCTTGTACAATTATCTTGCTTCTTCAATAACCTTAATGCAAAGCATAGTGTGGCCAATAGTCACAACAGGCGTGGCCACCATCACCACCACAACACCCAGAATCCCCCATTGAATCCGAGGCTTGATCTCGCCTTTCTTGCGCTGCAAGCATGGAAGAGTGTCATCTATTCCGACCCAAAAAACTTCACTGCCAATTGGGTAGGTCCTAGAGTTTGCAATTACACAGGTGTGTATTGTGCTCCATCACAAGATGACCCTAAAGTGACAGTTGTAGCAGGCATTGACCTTAACCACGGCGACATAGCCGGCTTCCTACCGGCGGAATTAGGCCTGCTTTCAGACCTTGCTCTGCTCCATCTCAACAGCAACCGCTTCTGCGGCATCCTCCCAAGAACACTAAGCAACCTCAGCCTCCTTCACGAGCTTGATCTTAGCAACAACAGATTTGTTGGACCTTTTCCAACGGTTGTTCTTTCCCTTCCTTCCCTCAGATACCTTGACATTCGGTTCAACGAATTCGAAGGCTCATTGCCTGTTGATCTCTTTAACAAAACCTTTGATGCAATATTTCTCAATAACAACCGTCTTAGCAGTTCCATCCCACGAAGCTTCGGCCGAATCTCGGCCTCTGTCCTGGTTTTTGCCAACAACAGATTCGGAGGCTGTCTTCCAGAAAGCATAGTGAACTTAGCTGAAACACTGGAAGAGCTTGTCATGATCAACACCAGTTTACAAGGTTGTCTGCCACAGCAAGTTGGATTTCTCTACAAATTAAGAGTATTTGATGTTAGTTTCAACAAAATTGTTGGCCCAATTCCTTATAGCCTTGCAGGGCTTTCTCATTTGGAGCAGCTCAATTTGGCACACAATATGATGACCGGCATAGTCCCTATGGGAGTTTGTGAGCTTCCCAACTTGGCGAATTTCACATTTTCTTATAACTTCTTCTGCGAGGAAGAGGGAATTTGCCGGAACGTGACATCTAAAAGAACTGTCTTTGATGATCGCCGCAACTGTTTGCCAGAGAAGCCGCTACAGAGGAGCAAGAAGGAGTGCAATGCTGTAAATCAGAACCCTGTTGATTGCATAAAACTTTGTTGTACCACAGAAGGTGGTTTTGGAAACAATGTCACAAGTTCTAGCTCAATGCCAACAATGCCTATTTCTGCACCTCCTTTTATTGCACCAAGCCACCCATGA 1260 0.4516 MGLLSSSYSSSFTTFALFLFLVQLSCFFNNLNAKHSVANSHNRRGHHHHHNTQNPPLNPRLDLAFLALQAWKSVIYSDPKNFTANWVGPRVCNYTGVYCAPSQDDPKVTVVAGIDLNHGDIAGFLPAELGLLSDLALLHLNSNRFCGILPRTLSNLSLLHELDLSNNRFVGPFPTVVLSLPSLRYLDIRFNEFEGSLPVDLFNKTFDAIFLNNNRLSSSIPRSFGRISASVLVFANNRFGGCLPESIVNLAETLEELVMINTSLQGCLPQQVGFLYKLRVFDVSFNKIVGPIPYSLAGLSHLEQLNLAHNMMTGIVPMGVCELPNLANFTFSYNFFCEEEGICRNVTSKRTVFDDRRNCLPEKPLQRSKKECNAVNQNPVDCIKLCCTTEGGFGNNVTSSSSMPTMPISAPPFIAPSHP 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01886 419 Pfam Leucine rich repeat 135 192 IPR001611 GO:0005515
Arst3g01886 419 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 23 398 - -
Arst3g01886 419 FunFam Leucine-rich repeat extensin-like protein 1 65 226 - -
Arst3g01886 419 SUPERFAMILY L domain-like 66 340 - -
Arst3g01886 419 Gene3D Ribonuclease Inhibitor 65 354 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01886 Arst-Chr3 22179205 22180706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01886 58 411 Trihelix Transcription Factor Family AT2G15880 52.260 1.13e-135 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01886 - - aip:107632616 758.829