Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01876 ATGGATGAATTGGAAAGTAGAAGTGAAGCTTCTCCATCTTCAACAAACAAGGAGAAGATTGAGAGAAGGTTCATTGAGAGAAACAGAAGGAAGCACATGAAGATGCTCTACTCCACACTCAACTCTCTTCTCCCTAACGACCCCAACCCCACTAGGCCCAAGTGGTTACCACTGCTATTGCTTGATCAAGTGGACAAGGCCTTAAATTACATCAAGAGCTTAGAGGAGAAGGTAAAAATGTCTAAGGAGAAGAAAAATAGCTTACTATTGAGAATGGGAAGAAAGAGGACACGTGGCGCTTGCGACGATGGTAATCGCCCCAAACCGCCGCAACTAGAGGTTCATGAAATGGGTTCATGTCTTCAAATTGTAATGACATGTGGATTAGATTCCCAGTTCATATTCTATAAAATCATTCATATTCTGAATGAAGAAAACATCGATGTTAAGAGTGCCAATTCTTCGCTCATCGGAAATTCCATGCACCATGTTGTTCATGCAGAGATTCCACAATCTTTGCTTCAATTGGGTGCGACTAAAGTAAGGGAGAGTTTGAAAAGGTTTGTGCAGGAACCAATTAGTAAAAATGAATTACAATCTGATCATGAGTTGTTAGATTTTGAGATCGATACTGCTGAATTAGCGGAGCTTCTAGATTTCTTAGCATAA 669 0.4036 MDELESRSEASPSSTNKEKIERRFIERNRRKHMKMLYSTLNSLLPNDPNPTRPKWLPLLLLDQVDKALNYIKSLEEKVKMSKEKKNSLLLRMGRKRTRGACDDGNRPKPPQLEVHEMGSCLQIVMTCGLDSQFIFYKIIHILNEENIDVKSANSSLIGNSMHHVVHAEIPQSLLQLGATKVRESLKRFVQEPISKNELQSDHELLDFEIDTAELAELLDFLA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01876 222 Gene3D - 9 99 IPR036638 GO:0046983
Arst3g01876 222 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 19 95 IPR036638 GO:0046983
Arst3g01876 222 Coils Coil 64 91 - -
Arst3g01876 222 Pfam Helix-loop-helix DNA-binding domain 22 75 IPR011598 GO:0046983
Arst3g01876 222 MobiDBLite consensus disorder prediction 1 20 - -
Arst3g01876 222 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 17 74 IPR011598 GO:0046983
Arst3g01876 222 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 12 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01876 Arst-Chr3 22029662 22031414 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01876 9 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 32.812 2.52e-21 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst3g01876 HLH 9.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01876 - - tpra:123913718 206.838