Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01874 ATGGATCAATTGGGAAGTAGAAGTGAAGCTTCTCCATCTTCAACCAACGACAAGAAGATTGAGAGAAGGCTCATTGAGAAAAAGAGAAGGAACCACATGAGGATGCTCTACTCCAAACTCAACTCTCTTCTCTCTATGGACCACAACTCCATTAGTCTCAAGCGCTGCCATTGGCTGATCGATCAAGTGGATAAGGCCATAAACTATATAAAAAATTTAGAGGAGAAGGTGAAGATGGCTAAGGAGAAGAGAGAGAGCTTGTTAGGAATGGGAAGAAACAGGACACGTGGCGCTGGCGGCCTTCGTGATCTCTCGAAACCGCCACAGCTAATGGTTCATGAAATGGGTTCATATCTTCAAATTGTAATGACATGTGGATTAGATTCCCAGTTCATATTCTCTGAAATCATTCGTATTCTGAATGAAGAGAACATTGATGTCAAGAGTGTCAAATCCTCACTCGTCGAAAATTCCATGCACCATGTTGTTCATGCAGAGATTTCACAATTTTTGCTTCAGTTGGGTGCAACTAAAGTAAGTGAGAGATTGAAAAGGTTTGTGAATGAACCAACCAGTGAAATTGAATTACAATCTGATCATCAGTTATTGGATTTTGAGATTGATACTGATGAATTAGCGGAGCTTCTAGATTTTTTAGAAGAGAAATGA 669 0.4006 MDQLGSRSEASPSSTNDKKIERRLIEKKRRNHMRMLYSKLNSLLSMDHNSISLKRCHWLIDQVDKAINYIKNLEEKVKMAKEKRESLLGMGRNRTRGAGGLRDLSKPPQLMVHEMGSYLQIVMTCGLDSQFIFSEIIRILNEENIDVKSVKSSLVENSMHHVVHAEISQFLLQLGATKVSERLKRFVNEPTSEIELQSDHQLLDFEIDTDELAELLDFLEEK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01874 222 Coils Coil 63 90 - -
Arst3g01874 222 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 187 - -
Arst3g01874 222 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 88 IPR036638 GO:0046983
Arst3g01874 222 Gene3D - 9 96 IPR036638 GO:0046983
Arst3g01874 222 MobiDBLite consensus disorder prediction 1 22 - -
Arst3g01874 222 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 17 73 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01874 Arst-Chr3 21985935 21987353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01874 12 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 30.890 2.81e-20 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01874 - - gmx:100805461 202.216