Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01860 ATGAGGTCATGGATGTTCAATTTTGATCTTGTTCTGATCTTTCTCATGTCATTCCAGTTCCATGTATCCATTGAATCTGATAGCATCTTTCCAGGGCAGAAACTTTCAGGAAATCAAACTCTAGTTTCCTATGGACAAATATTTGAAATGGGTTTCTTCTCACCGTCAGGTTCAGAACTTGACAAGCATGGCAATCTCTCTCTCTATACTTCCACCGGTCATGCAGTTTGGTCAACCAACTCTTCCTTTAGTTTGGGTCCCTTGGATTCGATAGCTGCTAATCTTCGGGAAGATGGAAATTTTATTATAAGCAGGTCAGTCGATGACTACAGTTGGCAAAGCTTTGATTACCCAACTGATACCTTGCTGCCTAATGCGTATTTGGAATATGATAATGACAGAGGTATTAAAAGGGTTCTGAAATCTTGGCTAGCTACAAGTAATCCATCAACTGGCAACTTCTCTGCTGAGGTAACTACAGTTTCTGTGGATTTAGCTGAGGTTCAATTGTTGCAAAATGATGGTTTTACTGAGTCTAAATTCTGCATAAATCGGTTTCATGAAACCATAGATTACGTGTATGATTTTGAATTTCACTTTATAATATACGCAGACATTTACTCGTATGTTTTGTTTTCATATGGCAACTCATACAATCTTGCAAGATATGTGTTAGATGTATCTGGAAAGCTCAAACTTTTAGGGTGGTCAAACGAATGGGTTACCGTCAACATGGACCACAAAAAATGTGACTTTCTCGGTCATAATGAGGATACAGGAGTGAATGGCAAACATAGTGGAAGGAAGAATGCTACTTGGGTGGTTGTGGAGGTGGTGATTGGGCTTACTACTGTGATTGTTGCTATTGCCATTTTGCTGATAAGGCTATGGAAGAGAGGCACCACCACTTCATCTAAGGTAATGGGAGGAGATACATTGAAGCAGTACAACTACAGAGATTTGAGAAAAGCAACTAGAAACTTCACAATTAAGCTTGGAAACGGTGGTTTCAGCACTGTTTACAAAGGGGAATTCCCTGATTCAACTTTCGTAGCTGTCAAGGAACTTCGAGGACACTTTCAAGAAGAAAAACAGCTTCGAGCAGAACTCAATACGGTAGGGCTGATCCAGCACAAAAATCTTGTTCGCTTACTTGGATTCTGCTTACAAGGTTCCCAGAGATTCATAATTTATGATTACATGCCAAATGGTTCTCTAGAATCTCACTTGTTCCAGAGTGATTCTAATGTCTTAGATTGGCGAACTAGATACAATATTATTCTTGCGACTGCCAAAGGTTTAGCTTACTTACACGAGCATTGTAGAGACTGCATCATTCATTGCGACATCAAGCCGGAAAACATTTTGTTGGATGCTGAATTTAATCCTCAAGTCGCGGATTTTGGCTTGGCAAAGCTTCTAGGCCGAGACTTCAGCCGGGTTCTTACCACCATGAGAGGAACAAGAGGCTATCTAGCACCAGAGTGGTTCTCTGGTGTCCCAGTCACTGCAAAAGTTGATGTGTATAGCTACGGCCAGGTCCTTCTTGAGATCATTTCAGGTAGAAGGAATATGGATCTAGTAAATGACGATCTAGCTAGTTATTTCCCGGCAATTGTTTTCAATGCATTGAACAATGGGGAGGATGTTCTGCCTTTAGTAGATTCCAAACTACAAGGCAAATTCAGCGCAGAAGAGGTAAATAGAGCATGCAAGGTTGGTTGTTGGTGCATTCAAGATGATGAGAATGATAGACCAACAATGAAAGAGGTTGTTCAAGCTTTGGAAGGAAATCTTGATGTAGATATTCCTCCTATTCCCCAGTTTTTCCTGTCCTTAGCAGAACCTTCTGTCCAAAAAGGTGATCTGAAGGAAAGCAAGGATTATAGTACATCGAGCACACTACCTTCAAGTTTCAGCTTTCAAGCACCAGTTCACGCAGTTCAGGATGAACCTTGA 1959 0.4084 MRSWMFNFDLVLIFLMSFQFHVSIESDSIFPGQKLSGNQTLVSYGQIFEMGFFSPSGSELDKHGNLSLYTSTGHAVWSTNSSFSLGPLDSIAANLREDGNFIISRSVDDYSWQSFDYPTDTLLPNAYLEYDNDRGIKRVLKSWLATSNPSTGNFSAEVTTVSVDLAEVQLLQNDGFTESKFCINRFHETIDYVYDFEFHFIIYADIYSYVLFSYGNSYNLARYVLDVSGKLKLLGWSNEWVTVNMDHKKCDFLGHNEDTGVNGKHSGRKNATWVVVEVVIGLTTVIVAIAILLIRLWKRGTTTSSKVMGGDTLKQYNYRDLRKATRNFTIKLGNGGFSTVYKGEFPDSTFVAVKELRGHFQEEKQLRAELNTVGLIQHKNLVRLLGFCLQGSQRFIIYDYMPNGSLESHLFQSDSNVLDWRTRYNIILATAKGLAYLHEHCRDCIIHCDIKPENILLDAEFNPQVADFGLAKLLGRDFSRVLTTMRGTRGYLAPEWFSGVPVTAKVDVYSYGQVLLEIISGRRNMDLVNDDLASYFPAIVFNALNNGEDVLPLVDSKLQGKFSAEEVNRACKVGCWCIQDDENDRPTMKEVVQALEGNLDVDIPPIPQFFLSLAEPSVQKGDLKESKDYSTSSTLPSSFSFQAPVHAVQDEP 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01860 652 SMART serkin_6 326 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01860 652 FunFam Serine/threonine-protein kinase 401 603 - -
Arst3g01860 652 Gene3D Transferase(Phosphotransferase) domain 1 401 602 - -
Arst3g01860 652 SUPERFAMILY Protein kinase-like (PK-like) 306 596 IPR011009 -
Arst3g01860 652 PANTHER OS07G0415500 PROTEIN 263 607 - -
Arst3g01860 652 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 143 IPR036426 -
Arst3g01860 652 CDD STKc_IRAK 332 597 - -
Arst3g01860 652 ProSiteProfiles Bulb-type lectin domain profile. 26 152 IPR001480 -
Arst3g01860 652 MobiDBLite consensus disorder prediction 622 652 - -
Arst3g01860 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Arst3g01860 652 Gene3D Phosphorylase Kinase; domain 1 293 400 - -
Arst3g01860 652 FunFam S-receptor-like serine/threonine-protein kinase 297 400 - -
Arst3g01860 652 MobiDBLite consensus disorder prediction 628 644 - -
Arst3g01860 652 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Arst3g01860 652 SMART blect_4 32 118 IPR001480 -
Arst3g01860 652 Pfam D-mannose binding lectin 59 143 IPR001480 -
Arst3g01860 652 Pfam Protein kinase domain 331 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01860 652 Gene3D - 26 185 - -
Arst3g01860 652 ProSiteProfiles Protein kinase domain profile. 326 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01860 Arst-Chr3 21799218 21803422 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01860 306 605 Receptor kinase-like Gene Family AT5G20050 42.453 2.20e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst3g01860 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01860 - - ahf:112789804 1226.85