Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01857 ATGCTCATCCAGAAACTTTCAGGAAATCAAACTCTAGTTTCCTATGGACAAATATTTGAAATGGGTTTCTTCTCACCGTCAGGTTCAGAACTTGACAAGCATGGCAATCTCTCTCTCTATACTTCCACCGGTCATGCAGTTTGGTCAACCAACTCTTCCTTTAGTTTGGGTCCCTTGGATTCGATAGCTGCTAATCTTCGGGAAGATGGAAATTTTATTATAAGCAGGTCAGTCGATGACTACAGTTGGCAAAGCTTTGATTACCCAACTGATACCTTGCTGCCTAATGCGTATTTGGAATATGATAATGACAGAGGTATTAAAAGGGTTCTGAAATCTTGGCTAGCTACAAGTAATCCATCAACTGGCAACTTCTCTGCTGAGGTAACTACAGTTTCTGTGGATTTAGCTGAGGTTCAATTGTTGCAAAATGATGGTTTTACTGAGTCTAAATTCTGCATAAATCGGTTTCATGAAACCATAGATTACGTGTATGATTTTGAATTTCACTTTATAATATACGCAGACATTTACTCGTATGTTTTGTTTTCATATGGCAACTCATACAATCTTGCAAGATATGTGTTAGATGTATCTGGAAAGCTCAAACTTTTAGGGTGGTCAAACGAATGGGTTACCGTCAACATGGACCACAAAAAATGTGACTTTCTCGGTCATAATGAGGATACAGGAGTGAATGGCAAACATAGTGGAAGGAAGAATGCTACTTGGGTGGTTGTGGAGGTGGTGATTGGGCTTACTACTGTGATTGTTGCTATTGCCATTTTGCTGATAAGGCTATGGAAGAGAGGCACCACCACTTCATCTAAGGTAATGGGAGGAGATACATTGAAGCAGTACAACTACAGAGATTTGAGAAAAGCAACTAGAAACTTCACAATTAAGCTTGGAAACGGTGGTTTCAGCACTGTTTACAAAGGGGAATTCCCTGATTCAACTTTCGTAGCTGTCAAGGAACTTCGAGGACACTTTCAAGAAGAAAAACAGCTTCGAGCAGAACTCAATACGGTAGGGCTGATCCAGCACAAAAATCTTGTTCGCTTACTTGGATTCTGCTTACAAGGTTCCCAGAGATTCATAATTTATGATTACATGCCAAATGGTTCTCTAGAATCTCACTTGTTCCAGAGTGATTCTAATGTCTTAGATTGGCGAACTAGATACAATATTATTCTTGCGACTGCCAAAGGTTTAGCTTACTTACACGAGCATTGTAGAGACTGCATCATTCATTGCGACATCAAGCCGGAAAACATTTTGTTGGATGCTGAATTTAATCCTCAAGTCGCGGATTTTGGCTTGGCAAAGCTTCTAGGCCGAGACTTCAGCCGGGTTCTTACCACCATGAGAGGAACAAGAGGCTATCTAGCACCAGAGTGGTTCTCTGGTGTCCCAGTCACTGCAAAAGTTGATGTGTATAGCTACGGCCAGGTCCTTCTTGAGATCATTTCAGGTAGAAGGAATATGGATCTAGTAAATGACGATCTAGCTAGTTATTTCCCGGCAATTGTTTTCAATGCATTGAACAATGGGGAGGATGTTCTGCCTTTAGTAGATTCCAAACTACAAGGCAAATTCAGCGCAGAAGAGGTAAATAGAGCATGCAAGGTTGGTTGTTGGTGCATTCAAGATGATGAGAATGATAGACCAACAATGAAAGAGGTTGTTCAAGCTTTGGAAGGAAATCTTGATGTAGATATTCCTCCTATTCCCCAGTTTTTCCTGTCCTTAGCAGAACCTTCTGTCCAAAAAGGTGATCTGAAGGAAAGCAAGGATTATAGTACATCGAGCACACTACCTTCAAGTTTCAGCTTTCAAGCACCAGTTCACGCAGTTCAGGATGAACCTTGA 1872 0.4097 MLIQKLSGNQTLVSYGQIFEMGFFSPSGSELDKHGNLSLYTSTGHAVWSTNSSFSLGPLDSIAANLREDGNFIISRSVDDYSWQSFDYPTDTLLPNAYLEYDNDRGIKRVLKSWLATSNPSTGNFSAEVTTVSVDLAEVQLLQNDGFTESKFCINRFHETIDYVYDFEFHFIIYADIYSYVLFSYGNSYNLARYVLDVSGKLKLLGWSNEWVTVNMDHKKCDFLGHNEDTGVNGKHSGRKNATWVVVEVVIGLTTVIVAIAILLIRLWKRGTTTSSKVMGGDTLKQYNYRDLRKATRNFTIKLGNGGFSTVYKGEFPDSTFVAVKELRGHFQEEKQLRAELNTVGLIQHKNLVRLLGFCLQGSQRFIIYDYMPNGSLESHLFQSDSNVLDWRTRYNIILATAKGLAYLHEHCRDCIIHCDIKPENILLDAEFNPQVADFGLAKLLGRDFSRVLTTMRGTRGYLAPEWFSGVPVTAKVDVYSYGQVLLEIISGRRNMDLVNDDLASYFPAIVFNALNNGEDVLPLVDSKLQGKFSAEEVNRACKVGCWCIQDDENDRPTMKEVVQALEGNLDVDIPPIPQFFLSLAEPSVQKGDLKESKDYSTSSTLPSSFSFQAPVHAVQDEP 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01857 623 FunFam S-receptor-like serine/threonine-protein kinase 268 371 - -
Arst3g01857 623 FunFam Serine/threonine-protein kinase 372 574 - -
Arst3g01857 623 Pfam D-mannose binding lectin 30 114 IPR001480 -
Arst3g01857 623 Gene3D - 3 154 - -
Arst3g01857 623 ProSiteProfiles Protein kinase domain profile. 297 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01857 623 SUPERFAMILY Protein kinase-like (PK-like) 277 567 IPR011009 -
Arst3g01857 623 CDD STKc_IRAK 303 568 - -
Arst3g01857 623 MobiDBLite consensus disorder prediction 593 623 - -
Arst3g01857 623 PANTHER OS07G0415500 PROTEIN 234 578 - -
Arst3g01857 623 SMART blect_4 3 89 IPR001480 -
Arst3g01857 623 Pfam Protein kinase domain 302 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01857 623 MobiDBLite consensus disorder prediction 599 615 - -
Arst3g01857 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Arst3g01857 623 SUPERFAMILY alpha-D-mannose-specific plant lectins 31 114 IPR036426 -
Arst3g01857 623 Gene3D Phosphorylase Kinase; domain 1 264 371 - -
Arst3g01857 623 SMART serkin_6 297 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01857 623 Gene3D Transferase(Phosphotransferase) domain 1 372 573 - -
Arst3g01857 623 ProSiteProfiles Bulb-type lectin domain profile. 1 87 IPR001480 -
Arst3g01857 623 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01857 Arst-Chr3 21799218 21803422 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01857 277 576 Receptor kinase-like Gene Family AT5G20050 42.453 1.31e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst3g01857 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01857 - - ahf:112789804 1221.84