Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01854 ATGACGCATGCTCATCCAGGGCAGAAACTTTCAGGAAATCAAACTCTAGTTTCCTATGGACAAATATTTGAAATGGGTTTCTTCTCACCGTCAGGTTCAGGTAACAACTCTCGCAATTATTACCTAGGGATATGGTACAAAGGGTTACCAACGCCACAAAGAACAGTGGTGTGGGTAGCCAACAGGGATCATCCTGTATCTGATCCATACTCTTCTTGGTTAGAACTTGACAAGCATGGCAATCTCTCTCTCTATACTTCCACCGGTCATGCAGTTTGGTCAACCAACTCTTCCTTTAGTTTGGGTCCCTTGGATTCGATAGCTGCTAATCTTCGGGAAGATGGAAATTTTATTATAAGCAGGTCAGTCGATGACTACAGTTGGCAAAGCTTTGATTACCCAACTGATACCTTGCTGCCTAATGCGTATTTGGAATATGATAATGACAGAGGTATTAAAAGGGTTCTGAAATCTTGGCTAGCTACAAGTAATCCATCAACTGGCAACTTCTCTGCTGAGGTAACTACAGTTTCTGTGGATTTAGCTGAGGTTCAATTGTTGCAAAATGATGGTTTTACTGAGTCTAAATTCTGCATAAATCGGTTTCATGAAACCATAGATTACGTGTATGATTTTGAATTTCACTTTATAATATACGCAGACATTTACTCGTATGTTTTGTTTTCATATGGCAACTCATACAATCTTGCAAGATATGTGTTAGATGTATCTGGAAAGCTCAAACTTTTAGGGTGGTCAAACGAATGGGTTACCGTCAACATGGACCACAAAAAATGTGACTTTCTCGGTCATAATGAGGATACAGGAGTGAATGGCAAACATAGTGGAAGGAAGAATGCTACTTGGGTGGTTGTGGAGGTGGTGATTGGGCTTACTACTGTGATTGTTGCTATTGCCATTTTGCTGATAAGGCTATGGAAGAGAGGCACCACCACTTCATCTAAGGTAATGGGAGGAGATACATTGAAGCAGTACAACTACAGAGATTTGAGAAAAGCAACTAGAAACTTCACAATTAAGCTTGGAAACGGTGGTTTCAGCACTGTTTACAAAGGGGAATTCCCTGATTCAACTTTCGTAGCTGTCAAGGAACTTCGAGGACACTTTCAAGAAGAAAAACAGCTTCGAGCAGAACTCAATACGGTAGGGCTGATCCAGCACAAAAATCTTGTTCGCTTACTTGGATTCTGCTTACAAGGTTCCCAGAGATTCATAATTTATGATTACATGCCAAATGGTTCTCTAGAATCTCACTTGTTCCAGAGTGATTCTAATGTCTTAGATTGGCGAACTAGATACAATATTATTCTTGCGACTGCCAAAGGTTTAGCTTACTTACACGAGCATTGTAGAGACTGCATCATTCATTGCGACATCAAGCCGGAAAACATTTTGTTGGATGCTGAATTTAATCCTCAAGTCGCGGATTTTGGCTTGGCAAAGCTTCTAGGCCGAGACTTCAGCCGGGTTCTTACCACCATGAGAGGAACAAGAGGCTATCTAGCACCAGAGTGGTTCTCTGGTGTCCCAGTCACTGCAAAAGTTGATGTGTATAGCTACGGCCAGGTCCTTCTTGAGATCATTTCAGGTAGAAGGAATATGGATCTAGTAAATGACGATCTAGCTAGTTATTTCCCGGCAATTGTTTTCAATGCATTGAACAATGGGGAGGATGTTCTGCCTTTAGTAGATTCCAAACTACAAGGCAAATTCAGCGCAGAAGAGGTAAATAGAGCATGCAAGGTTGGTTGTTGGTGCATTCAAGATGATGAGAATGATAGACCAACAATGAAAGAGGTTGTTCAAGCTTTGGAAGGAAATCTTGATGTAGATATTCCTCCTATTCCCCAGTTTTTCCTGTCCTTAGCAGAACCTTCTGTCCAAAAAGGTGATCTGAAGGAAAGCAAGGATTATAGTACATCGAGCACACTACCTTCAAGTTTCAGCTTTCAAGCACCAGTTCACGCAGTTCAGGATGAACCTTGA 2007 0.4136 MTHAHPGQKLSGNQTLVSYGQIFEMGFFSPSGSGNNSRNYYLGIWYKGLPTPQRTVVWVANRDHPVSDPYSSWLELDKHGNLSLYTSTGHAVWSTNSSFSLGPLDSIAANLREDGNFIISRSVDDYSWQSFDYPTDTLLPNAYLEYDNDRGIKRVLKSWLATSNPSTGNFSAEVTTVSVDLAEVQLLQNDGFTESKFCINRFHETIDYVYDFEFHFIIYADIYSYVLFSYGNSYNLARYVLDVSGKLKLLGWSNEWVTVNMDHKKCDFLGHNEDTGVNGKHSGRKNATWVVVEVVIGLTTVIVAIAILLIRLWKRGTTTSSKVMGGDTLKQYNYRDLRKATRNFTIKLGNGGFSTVYKGEFPDSTFVAVKELRGHFQEEKQLRAELNTVGLIQHKNLVRLLGFCLQGSQRFIIYDYMPNGSLESHLFQSDSNVLDWRTRYNIILATAKGLAYLHEHCRDCIIHCDIKPENILLDAEFNPQVADFGLAKLLGRDFSRVLTTMRGTRGYLAPEWFSGVPVTAKVDVYSYGQVLLEIISGRRNMDLVNDDLASYFPAIVFNALNNGEDVLPLVDSKLQGKFSAEEVNRACKVGCWCIQDDENDRPTMKEVVQALEGNLDVDIPPIPQFFLSLAEPSVQKGDLKESKDYSTSSTLPSSFSFQAPVHAVQDEP 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01854 668 FunFam Serine/threonine-protein kinase 417 619 - -
Arst3g01854 668 Gene3D - 2 131 IPR036426 -
Arst3g01854 668 Pfam D-mannose binding lectin 55 159 IPR001480 -
Arst3g01854 668 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Arst3g01854 668 CDD STKc_IRAK 348 613 - -
Arst3g01854 668 MobiDBLite consensus disorder prediction 638 668 - -
Arst3g01854 668 SMART serkin_6 342 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01854 668 CDD B_lectin 10 134 IPR001480 -
Arst3g01854 668 Gene3D Phosphorylase Kinase; domain 1 309 416 - -
Arst3g01854 668 ProSiteProfiles Bulb-type lectin domain profile. 1 132 IPR001480 -
Arst3g01854 668 MobiDBLite consensus disorder prediction 644 660 - -
Arst3g01854 668 Pfam Protein kinase domain 347 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01854 668 ProSiteProfiles Protein kinase domain profile. 342 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01854 668 SUPERFAMILY Protein kinase-like (PK-like) 322 612 IPR011009 -
Arst3g01854 668 Gene3D Transferase(Phosphotransferase) domain 1 417 618 - -
Arst3g01854 668 SMART blect_4 7 134 IPR001480 -
Arst3g01854 668 FunFam S-receptor-like serine/threonine-protein kinase 313 416 - -
Arst3g01854 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Arst3g01854 668 PANTHER OS07G0415500 PROTEIN 5 267 - -
Arst3g01854 668 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 159 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01854 Arst-Chr3 21799218 21803423 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01854 322 621 Receptor kinase-like Gene Family AT5G20050 42.453 6.40e-71 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst3g01854 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01854 - - ahf:112789804 1201.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01854 3 21799218 21803423 Arst3g01854 3 21799218 21803423 ECH
Arst8g02140 8 30196341 30200856 Arst3g01854 3 21799218 21803423 PCT