Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01852 ATGAGGTCATGGATGTTCAATTTTGATCTTGTTCTGATCTTTCTCATGTCATTCCAGTTCCATGTATCCATTGAATCTGATAGCATCTTTCCAGGGCAGAAACTTTCAGGAAATCAAACTCTAGTTTCCTATGGACAAATATTTGAAATGGGTTTCTTCTCACCGTCAGGTTCAGGTAACAACTCTCGCAATTATTACCTAGGGATATGGTACAAAGGGTTACCAACGCCACAAAGAACAGTGGTGTGGGTAGCCAACAGGGATCATCCTGTATCTGATCCATACTCTTCTTGGTTAGAACTTGACAAGCATGGCAATCTCTCTCTCTATACTTCCACCGGTCATGCAGTTTGGTCAACCAACTCTTCCTTTAGTTTGGGTCCCTTGGATTCGATAGCTGCTAATCTTCGGGAAGATGGAAATTTTATTATAAGCAGGTCAGTCGATGACTACAGTTGGCAAAGCTTTGATTACCCAACTGATACCTTGCTGCCTAATGCGTATTTGGAATATGATAATGACAGAGGTATTAAAAGGGTTCTGAAATCTTGGCTAGCTACAAGTAATCCATCAACTGGCAACTTCTCTGCTGAGGTAACTACAGTTTCTGTGGATTTAGCTGAGGTTCAATTGTTGCAAAATGATGGTTTTACTGAGTCTAAATTCTGCATAAATCGGTTTCATGAAACCATAGATTACGTGTATGATTTTGAATTTCACTTTATAATATACGCAGACATTTACTCGTATGTTTTGTTTTCATATGGCAACTCATACAATCTTGCAAGATATGTGTTAGATGTATCTGGAAAGCTCAAACTTTTAGGGTGGTCAAACGAATGGGTTACCGTCAACATGGACCACAAAAAATGTGACTTTCTCGGTCATAATGAGGATACAGGAGTGAATGGCAAACATAGTGGAAGGAAGAATGCTACTTGGGTGGTTGTGGAGGTGGTGATTGGGCTTACTACTGTGATTGTTGCTATTGCCATTTTGCTGATAAGGCTATGGAAGAGAGGCACCACCACTTCATCTAAGGTAATGGGAGGAGATACATTGAAGCAGTACAACTACAGAGATTTGAGAAAAGCAACTAGAAACTTCACAATTAAGCTTGGAAACGGTGGTTTCAGCACTGTTTACAAAGGGGAATTCCCTGATTCAACTTTCGTAGCTGTCAAGGAACTTCGAGGACACTTTCAAGAAGAAAAACAGCTTCGAGCAGAACTCAATACGGTAGGGCTGATCCAGCACAAAAATCTTGTTCGCTTACTTGGATTCTGCTTACAAGGTTCCCAGAGATTCATAATTTATGATTACATGCCAAATGGTTCTCTAGAATCTCACTTGTTCCAGAGTGATTCTAATGTCTTAGATTGGCGAACTAGATACAATATTATTCTTGCGACTGCCAAAGGTTTAGCTTACTTACACGAGCATTGTAGAGACTGCATCATTCATTGCGACATCAAGCCGGAAAACATTTTGTTGGATGCTGAATTTAATCCTCAAGTCGCGGATTTTGGCTTGGCAAAGCTTCTAGGCCGAGACTTCAGCCGGGTTCTTACCACCATGAGAGGAACAAGAGGCTATCTAGCACCAGAGTGGTTCTCTGGTGTCCCAGTCACTGCAAAAGTTGATGTGTATAGCTACGGCCAGGTCCTTCTTGAGATCATTTCAGGTAGAAGGAATATGGATCTAGTAAATGACGATCTAGCTAGTTATTTCCCGGCAATTGTTTTCAATGCATTGAACAATGGGGAGGATGTTCTGCCTTTAGTAGATTCCAAACTACAAGGCAAATTCAGCGCAGAAGAGGTAAATAGAGCATGCAAGGTTGGTTGTTGGTGCATTCAAGATGATGAGAATGATAGACCAACAATGAAAGAGGTTGTTCAAGCTTTGGAAGGAAATCTTGATGTAGATATTCCTCCTATTCCCCAGTTTTTCCTGTCCTTAGCAGAACCTTCTGTCCAAAAAGGTGATCTGAAGGAAAGCAAGGATTATAGTACATCGAGCACACTACCTTCAAGTTTCAGCTTTCAAGCACCAGTTCACGCAGTTCAGGATGAACCTTGA 2082 0.4107 MRSWMFNFDLVLIFLMSFQFHVSIESDSIFPGQKLSGNQTLVSYGQIFEMGFFSPSGSGNNSRNYYLGIWYKGLPTPQRTVVWVANRDHPVSDPYSSWLELDKHGNLSLYTSTGHAVWSTNSSFSLGPLDSIAANLREDGNFIISRSVDDYSWQSFDYPTDTLLPNAYLEYDNDRGIKRVLKSWLATSNPSTGNFSAEVTTVSVDLAEVQLLQNDGFTESKFCINRFHETIDYVYDFEFHFIIYADIYSYVLFSYGNSYNLARYVLDVSGKLKLLGWSNEWVTVNMDHKKCDFLGHNEDTGVNGKHSGRKNATWVVVEVVIGLTTVIVAIAILLIRLWKRGTTTSSKVMGGDTLKQYNYRDLRKATRNFTIKLGNGGFSTVYKGEFPDSTFVAVKELRGHFQEEKQLRAELNTVGLIQHKNLVRLLGFCLQGSQRFIIYDYMPNGSLESHLFQSDSNVLDWRTRYNIILATAKGLAYLHEHCRDCIIHCDIKPENILLDAEFNPQVADFGLAKLLGRDFSRVLTTMRGTRGYLAPEWFSGVPVTAKVDVYSYGQVLLEIISGRRNMDLVNDDLASYFPAIVFNALNNGEDVLPLVDSKLQGKFSAEEVNRACKVGCWCIQDDENDRPTMKEVVQALEGNLDVDIPPIPQFFLSLAEPSVQKGDLKESKDYSTSSTLPSSFSFQAPVHAVQDEP 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01852 693 ProSitePatterns Protein kinases ATP-binding region signature. 373 395 IPR017441 GO:0005524
Arst3g01852 693 CDD B_lectin 35 159 IPR001480 -
Arst3g01852 693 SUPERFAMILY Protein kinase-like (PK-like) 347 637 IPR011009 -
Arst3g01852 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Arst3g01852 693 FunFam S-receptor-like serine/threonine-protein kinase 338 441 - -
Arst3g01852 693 Pfam D-mannose binding lectin 80 184 IPR001480 -
Arst3g01852 693 FunFam Serine/threonine-protein kinase 442 644 - -
Arst3g01852 693 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 184 IPR036426 -
Arst3g01852 693 Gene3D - 20 156 IPR036426 -
Arst3g01852 693 ProSiteProfiles Protein kinase domain profile. 367 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01852 693 MobiDBLite consensus disorder prediction 663 693 - -
Arst3g01852 693 PANTHER OS07G0415500 PROTEIN 11 285 - -
Arst3g01852 693 Pfam Protein kinase domain 372 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01852 693 Gene3D Transferase(Phosphotransferase) domain 1 442 643 - -
Arst3g01852 693 CDD STKc_IRAK 373 638 - -
Arst3g01852 693 ProSiteProfiles Bulb-type lectin domain profile. 26 157 IPR001480 -
Arst3g01852 693 Gene3D Phosphorylase Kinase; domain 1 334 441 - -
Arst3g01852 693 MobiDBLite consensus disorder prediction 669 685 - -
Arst3g01852 693 SMART blect_4 32 159 IPR001480 -
Arst3g01852 693 SMART serkin_6 367 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01852 Arst-Chr3 21799218 21803423 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01852 347 646 Receptor kinase-like Gene Family AT5G20050 42.453 1.01e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst3g01852 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01852 - - ahf:112789804 1189.87