LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst3g01841	ATGATCTCTTTTGCAACAATAACAACAATAATGTCTTCCCTTCTCATATATCTCTTCCTTCTGAGAATAACCTTAGTTTCTTCGTCAACAGAATTTGTCTACAACACCAACTTCAACTCCACCAACATAAATCTCTATGCAAACGCCACTATTGATGATCACTCTCACTCTTCAATTCTCACCCTTACCAACCATGCCTCTTTCTCTATTGGCCGTGCTTTCTACCCTTCCAAGATCCCAACAAAATCTTCCTTTTCTTCCAACCCTTTACCGTTCTCAACCTCCTTCATCTTCTCCATTGCACCATTCAAGCACCTTCTCCCTGGCCATGGTTTTGTGTTCTTGTTCTCACCTTTTGAAGGAGCAAACGGGGTTAGCTCAGCTCAGCACCTTGGCCTCTTCAACTTGACCAACAATGGTAACCCCAAAAACCATGTTTTTGGGATTGAGTTTGATGTGTTCAAGAACCAAGAATTCAATGACATCAATGATAACCATGTGGGTTTGGATGTGAATTCTCTTACTTCTTTGGCCTCACACGATGCTGGATTTTGGGTCAGTGGAAAACATGATGAAAAGTTTAAGGAATTGAAGCTTAACAATGGTGAGAACTATCAAGTCTGGATTGAGTATTCAGATTCTAGAGTTAATGTAGCAATGGCTATTGCAGGGAAAAGAAGGCCTAATAGGCCTTTGATTAGTGAACTTGTGAATCTTTCTGATGTCTTTTTGGATGAAATGTTTGTGGGATTTTGTGGAGCAACAGGGCAACTTGTTGAGAGTCACAAGATTTTGGCATGGAGCTTTAGCAACTCAAATTTTTCAATCGGCGATGCTTTGGTGACTACGAATTTGCCTTCATTTGTGCTTCCAAAAGAACCAGTTTTGAAGTCAAGAGGTTTTGTTTCAGGTATCAGTTTTGGGATTTTTATCTTTGTTATTGGTAGTGCAGCTATGGTGTTTGTTGTTTTGCTCAAAAGAAAAAGAAGCAAAAGAATGGAGGAAGAGGGAGATATTGAAGACTGGGAATTAGAGTATTGGCCACACCGTATTAGTTATGAAGACATTTATGCTGCAACTAAAGGATTTTCAGAACAGAATATAATTGGGTTTGGAGGGAATGGAAAAGTTTATAAAGGGATTCTACAAGGAGTAGAGGTAGCAGTGAAAAGAATCCCTTATGACAGTGAATATGGTATGAGGGAGTTTCTATCTGAGATTTCAAGCTTAGGAAGATTGAAGCATAGGAATGTGGTTCCATTGAGGGGTTGGTGCAAGAAAGAGAGAGGAAGCTTGATCCTAATTTATGATTATATGGAGAATGGAAGTTTGGACAAGATAATATTTGATTCTGATGAGAACTCAATTTTCCATTGGAAAAACAGAATCAAGGTGCTGAAGGATGTGGCTATGGGGATATTGTATTTGCATGAGAGTTGGGAAGTTAAGGTGTTGCATAGGGACATAAAAGCAAGCAATGTGTTACTTGACAAGGATATGAATGCAAGGTTGGGGGATTTTGGACTCGCCCGGATGCATCATCATGAGCAGATACCTAACACCTCTCGAGTGATCGGAACGGTTGGCTACATGGCACCGGAACTGCTAAGAACCGGGAGAGCCTCGACGCAAACTGATGTGTTCAGCTTCGGCGTGTTGGTTCTAGAGGTTGTGTGTGGGAGAAGGCCTATAGAAGAGAATAAGCCAGCATTGGTTGGTTGGGTGTGGAGGCTAATGGAGAGAGGACAGTTGTGTTGTGCTCTTGATGAAAGATTGAAAATGAGGGGTGATGAAGATTATAGCATTGATGAAGTTGAGAGAGTTCTTCATCTTGGTTTGTTGTGCACACATTATGATCCTCAAGTTAGGCCAAGTATGAGGCAAGTTGTGAAGGTTTTGGAGGGTGAGAGTTTGGAAATAAGCTTAGTTGATAAAATAAATTCCGCTGCTGATGGATATAGTGGGGTTCACCCCACCATTGAAGATATATCTCAATGTTCTTTCACAACTCAATGTGAGGGCAGATGA	2028	0.4088	MISFATITTIMSSLLIYLFLLRITLVSSSTEFVYNTNFNSTNINLYANATIDDHSHSSILTLTNHASFSIGRAFYPSKIPTKSSFSSNPLPFSTSFIFSIAPFKHLLPGHGFVFLFSPFEGANGVSSAQHLGLFNLTNNGNPKNHVFGIEFDVFKNQEFNDINDNHVGLDVNSLTSLASHDAGFWVSGKHDEKFKELKLNNGENYQVWIEYSDSRVNVAMAIAGKRRPNRPLISELVNLSDVFLDEMFVGFCGATGQLVESHKILAWSFSNSNFSIGDALVTTNLPSFVLPKEPVLKSRGFVSGISFGIFIFVIGSAAMVFVVLLKRKRSKRMEEEGDIEDWELEYWPHRISYEDIYAATKGFSEQNIIGFGGNGKVYKGILQGVEVAVKRIPYDSEYGMREFLSEISSLGRLKHRNVVPLRGWCKKERGSLILIYDYMENGSLDKIIFDSDENSIFHWKNRIKVLKDVAMGILYLHESWEVKVLHRDIKASNVLLDKDMNARLGDFGLARMHHHEQIPNTSRVIGTVGYMAPELLRTGRASTQTDVFSFGVLVLEVVCGRRPIEENKPALVGWVWRLMERGQLCCALDERLKMRGDEDYSIDEVERVLHLGLLCTHYDPQVRPSMRQVVKVLEGESLEISLVDKINSAADGYSGVHPTIEDISQCSFTTQCEGR	675

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst3g01841	675	CDD	lectin_legume_LecRK_Arcelin_ConA	30	272	IPR001220	GO:0030246
	Arst3g01841	675	SUPERFAMILY	Protein kinase-like (PK-like)	341	634	IPR011009	-
	Arst3g01841	675	CDD	STKc_IRAK	369	635	-	-
	Arst3g01841	675	PANTHER	-	48	637	-	-
	Arst3g01841	675	FunFam	L-type lectin-domain containing receptor kinase S.4	439	645	-	-
	Arst3g01841	675	Gene3D	-	27	273	-	-
	Arst3g01841	675	Gene3D	Phosphorylase Kinase; domain 1	323	438	-	-
	Arst3g01841	675	FunFam	L-type lectin-domain containing receptor kinase S.4	28	277	-	-
	Arst3g01841	675	Pfam	Protein kinase domain	364	631	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst3g01841	675	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	484	496	IPR008271	GO:0004672\|GO:0006468
	Arst3g01841	675	Coils	Coil	325	345	-	-
	Arst3g01841	675	ProSiteProfiles	Protein kinase domain profile.	363	660	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst3g01841	675	SMART	serkin_6	363	633	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst3g01841	675	ProSitePatterns	Protein kinases ATP-binding region signature.	369	390	IPR017441	GO:0005524
	Arst3g01841	675	Gene3D	Transferase(Phosphotransferase) domain 1	439	648	-	-
	Arst3g01841	675	SUPERFAMILY	Concanavalin A-like lectins/glucanases	29	274	IPR013320	-
	Arst3g01841	675	Pfam	Legume lectin domain	30	273	IPR001220	GO:0030246
	Arst3g01841	675	FunFam	Putative L-type lectin-domain containing receptor kinase VII.2	322	438	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst3g01841	Arst-Chr3	21697429	21702585	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst3g01841	28	587	Receptor kinase-like Gene Family	AT4G04960	62.544	0.0	685

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Arst3g01841		Pkinase	6.3e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst3g01841	-		-	adu:107478122	1182.93