Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01840 ATGATCTCTTTTGCAACAATAACAACAATAATGTCTTCCCTTCTCATATATCTCTTCCTTCTGAGAATAACCTTAGTTTCTTCGTCAACAGAATTTGTCTACAACACCAACTTCAACTCCACCAACATAAATCTCTATGCAAACGCCACTATTGATGATCACTCTCACTCTTCAATTCTCACCCTTACCAACCATGCCTCTTTCTCTATTGGCCGTGCTTTCTACCCTTCCAAGATCCCAACAAAATCTTCCTTTTCTTCCAACCCTTTACCGTTCTCAACCTCCTTCATCTTCTCCATTGCACCATTCAAGCACCTTCTCCCTGGCCATGGTTTTGTGTTCTTGTTCTCACCTTTTGAAGGAGCAAACGGGGTTAGCTCAGCTCAGCACCTTGGCCTCTTCAACTTGACCAACAATGGTAACCCCAAAAACCATGTTTTTGGGATTGAGTTTGATGTGTTCAAGAACCAAGAATTCAATGACATCAATGATAACCATGTGGGTTTGGATGTGAATTCTCTTACTTCTTTGGCCTCACACGATGCTGGATTTTGGGTCAGTGGAAAACATGATGAAAAGTTTAAGGAATTGAAGCTTAACAATGGGCAACTTGTTGAGAGTCACAAGATTTTGGCATGGAGCTTTAGCAACTCAAATTTTTCAATCGGCGATGCTTTGGTGACTACGAATTTGCCTTCATTTGTGCTTCCAAAAGAACCAGTTTTGAAGTCAAGAGGTTTTGTTTCAGGTATCAGTTTTGGGATTTTTATCTTTGTTATTGGTAGTGCAGCTATGGTGTTTGTTGTTTTGCTCAAAAGAAAAAGAAGCAAAAGAATGGAGGAAGAGGGAGATATTGAAGACTGGGAATTAGAGTATTGGCCACACCGTATTAGTTATGAAGACATTTATGCTGCAACTAAAGGATTTTCAGAACAGAATATAATTGGGTTTGGAGGGAATGGAAAAGTTTATAAAGGGATTCTACAAGGAGTAGAGGTAGCAGTGAAAAGAATCCCTTATGACAGTGAATATGGTATGAGGGAGTTTCTATCTGAGATTTCAAGCTTAGGAAGATTGAAGCATAGGAATGTGGTTCCATTGAGGGGTTGGTGCAAGAAAGAGAGAGGAAGCTTGATCCTAATTTATGATTATATGGAGAATGGAAGTTTGGACAAGATAATATTTGATTCTGATGAGAACTCAATTTTCCATTGGAAAAACAGAATCAAGGTGCTGAAGGATGTGGCTATGGGGATATTGTATTTGCATGAGAGTTGGGAAGTTAAGGTGTTGCATAGGGACATAAAAGCAAGCAATGTGTTACTTGACAAGGATATGAATGCAAGGTTGGGGGATTTTGGACTCGCCCGGATGCATCATCATGAGCAGATACCTAACACCTCTCGAGTGATCGGAACGGTTGGCTACATGGCACCGGAACTGCTAAGAACCGGGAGAGCCTCGACGCAAACTGATGTGTTCAGCTTCGGCGTGTTGGTTCTAGAGGTTGTGTGTGGGAGAAGGCCTATAGAAGAGAATAAGCCAGCATTGGTTGGTTGGGTGTGGAGGCTAATGGAGAGAGGACAGTTGTGTTGTGCTCTTGATGAAAGATTGAAAATGAGGGGTGATGAAGATTATAGCATTGATGAAGTTGAGAGAGTTCTTCATCTTGGTTTGTTGTGCACACATTATGATCCTCAAGTTAGGCCAAGTATGAGGCAAGTTGTGAAGGTTTTGGAGGGTGAGAGTTTGGAAATAAGCTTAGTTGATAAAATAAATTCCGCTGCTGATGGATATAGTGGGGTTCACCCCACCATTGAAGATATATCTCAATGTTCTTTCACAACTCAATGTGAGGGCAGATGA 1866 0.411 MISFATITTIMSSLLIYLFLLRITLVSSSTEFVYNTNFNSTNINLYANATIDDHSHSSILTLTNHASFSIGRAFYPSKIPTKSSFSSNPLPFSTSFIFSIAPFKHLLPGHGFVFLFSPFEGANGVSSAQHLGLFNLTNNGNPKNHVFGIEFDVFKNQEFNDINDNHVGLDVNSLTSLASHDAGFWVSGKHDEKFKELKLNNGQLVESHKILAWSFSNSNFSIGDALVTTNLPSFVLPKEPVLKSRGFVSGISFGIFIFVIGSAAMVFVVLLKRKRSKRMEEEGDIEDWELEYWPHRISYEDIYAATKGFSEQNIIGFGGNGKVYKGILQGVEVAVKRIPYDSEYGMREFLSEISSLGRLKHRNVVPLRGWCKKERGSLILIYDYMENGSLDKIIFDSDENSIFHWKNRIKVLKDVAMGILYLHESWEVKVLHRDIKASNVLLDKDMNARLGDFGLARMHHHEQIPNTSRVIGTVGYMAPELLRTGRASTQTDVFSFGVLVLEVVCGRRPIEENKPALVGWVWRLMERGQLCCALDERLKMRGDEDYSIDEVERVLHLGLLCTHYDPQVRPSMRQVVKVLEGESLEISLVDKINSAADGYSGVHPTIEDISQCSFTTQCEGR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01840 621 Pfam Legume lectin domain 30 203 IPR001220 GO:0030246
Arst3g01840 621 Gene3D - 27 204 - -
Arst3g01840 621 PANTHER - 48 583 - -
Arst3g01840 621 Gene3D Phosphorylase Kinase; domain 1 269 384 - -
Arst3g01840 621 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 268 384 - -
Arst3g01840 621 SMART serkin_6 309 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01840 621 SUPERFAMILY Protein kinase-like (PK-like) 287 580 IPR011009 -
Arst3g01840 621 CDD STKc_IRAK 315 581 - -
Arst3g01840 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Arst3g01840 621 ProSitePatterns Protein kinases ATP-binding region signature. 315 336 IPR017441 GO:0005524
Arst3g01840 621 Gene3D Transferase(Phosphotransferase) domain 1 385 594 - -
Arst3g01840 621 Coils Coil 271 291 - -
Arst3g01840 621 CDD lectin_legume_LecRK_Arcelin_ConA 30 218 IPR001220 GO:0030246
Arst3g01840 621 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 218 IPR013320 -
Arst3g01840 621 ProSiteProfiles Protein kinase domain profile. 309 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01840 621 FunFam L-type lectin-domain containing receptor kinase S.4 385 591 - -
Arst3g01840 621 Pfam Protein kinase domain 310 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01840 Arst-Chr3 21697428 21702585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01840 28 533 Receptor kinase-like Gene Family AT4G04960 56.560 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Arst3g01840 Pkinase 5.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01840 - - adu:107478122 1223.38