Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01839 ATGATTGAGAACTGTGATGATGAGTTTCTAAAGTTTGATCTGGAATACCAACAGGATGTGACAGCAACTAAAAGAAATGAATTTGAGGATTATTTTTTGAAGCGAGAGTTGCTCATGGGAATATATGAGAAGGTTTTTGAAAGGCCTTCTCCTATCCAAGAAGAAAGCATTCCAATTGCTCTTACTGGTAGTGACATTCTTGCAAGGGCTAAAAATGGGACAGGCAAAACAGCTGCATTTTACATTCCTGCATTGGAAAAAATTGACCAGAAACAATCTATCCTGGCATAG 291 0.378 MIENCDDEFLKFDLEYQQDVTATKRNEFEDYFLKRELLMGIYEKVFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFYIPALEKIDQKQSILA 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01839 96 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 17 92 - -
Arst3g01839 96 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 26 54 IPR014014 GO:0003724
Arst3g01839 96 Pfam DEAD/DEAH box helicase 51 89 IPR011545 GO:0003676|GO:0005524
Arst3g01839 96 Gene3D - 4 95 IPR027417 -
Arst3g01839 96 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 90 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01839 Arst-Chr3 21679571 21682295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01839 28 89 Eukaryotic Initiation Factors Gene Family AT5G11200 46.774 7.45e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01839 K12614 - adu:107478123 192.586