Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01831 ATGAATTTGCAATCTAGCTTGTCTTTTATTAATGTAGAATCTCTTTGCACTGATACATTTGGCAGGCTTCTTGTTTGGTCACCGCGGTTAGCTTCTACACATGATGTAGTTTTGCACAACTTTTGTGAGCTTTCTATTGGTTCAGTTTGTCTTGCTGATATTCAGACCAAGGGGCGAGGTCGGTCAAAGAATGTCTGGGAGTCTCCGTTAGGTTGTTTCCTGTTTTTCTTTACTCTACAAATGGAGGATGGGCGAATAGTTCCATTGGTGCAGTATGTGGTTTCCCTTGCTATCACAAAAGCAGTGAAGGATATTTGCAACAAAAATGGATTACCCTCCATTGACGTCAAAATCAAGTGGCCAAATGATCTTTATTTAAATGGCTTAAAAGTTGGCGGCATTCTGTGCACCTCAACCTATAAATTGAAGAAGTTCAATGTCAGTGCAGGTAGCAAGACATTCTTGCCTCAGAACAAGAGAATTGAAATAGACGTAGCTGAGTATGATACTATTAAGTATTGGAAACAAAGGGCCTTGGGTTTGGAGAAATTGCTTGAGGCAAGCATCCAGAGAGAGCAGATACTCCAAGACAAGTTGCTTGAAAGGATCAATAACATTGAGAGGTAA 627 0.4035 MNLQSSLSFINVESLCTDTFGRLLVWSPRLASTHDVVLHNFCELSIGSVCLADIQTKGRGRSKNVWESPLGCFLFFFTLQMEDGRIVPLVQYVVSLAITKAVKDICNKNGLPSIDVKIKWPNDLYLNGLKVGGILCTSTYKLKKFNVSAGSKTFLPQNKRIEIDVAEYDTIKYWKQRALGLEKLLEASIQREQILQDKLLERINNIER 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01831 208 Coils Coil 189 208 - -
Arst3g01831 208 Gene3D Bira Bifunctional Protein; Domain 2 12 206 IPR045864 -
Arst3g01831 208 Pfam Biotin/lipoate A/B protein ligase family 28 150 IPR004143 GO:0036211
Arst3g01831 208 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 7 200 IPR004143 GO:0036211
Arst3g01831 208 PANTHER BIOTIN PROTEIN LIGASE 13 150 - -
Arst3g01831 208 SUPERFAMILY Class II aaRS and biotin synthetases 13 144 IPR045864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01831 Arst-Chr3 21528440 21529840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01831 155 207 Histidine Kinase Gene Family AT5G10720 52.830 1.10e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01831 K01942 - adu:107478225 419.083