Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01786 ATGGCTGCTTCTGCTGCAAGGAACAGTGGTAAATCCACAAAGGGTGCTGTTGTTGAAGATTCTCATCATCAAAGAGTAATTGCTGAAAGTGGAAGCCAACAAGATTTGGAGATGATGATGATAGATAAGGGAAAAGGCGTTGAGAGGCGGCAATGGAAGCCAGTTTTTGATGAAGCTTCCATGTCAAATAGGCCTCATAAGAAGATTAATCAATCACCACCATCACCATCATCATCATTTTTAAAACAACAAGAACCTCCTTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAGAATAGTGTTCCCTTTTGCATTTGAAGGCTCTCAAACTCAGAATCAAGCAATGCAATTCCCACACCAATTTGGAACCACAAACATGCCTCTCTTCCATCCACCACCACCACAAATTCAGCCATCACAATTACCATTACATCAAAACATGATATCTTTTGGGTCTCAACACCAACAACACCTTCAAAATCTTCAGTATTGGAGTGACACACTGAATCTAAGTCCAAGAGGGAGAGCCATGGCCATGATGAACAACAGAATAGGGCCTGATGGAAGGCCATTGTTTTCGCCTTCACCTCCGGTGCCATTGAATGCTACAAAGCTCTATAGAGGTGTGAGGCAGCGCCATTGGGGGAAATGGGTAGCAGAGATTCGCCTCCCTCGCAATAGGACTCGCCTATGGCTTGGGACATTCGACACGGCTGAGGACGCCGCCATGGCCTATGACCGCGAGGCCTTCAAGCTTAGAGGGGAGAATGCTAGGCTAAATTTCCCTGAGCTCTTTCTCAACAAGGACAAAGATCAATCAACAAAAATGGCACAAGATTCTTCTTCTTCTTCTGCTTCGGCATCAAAGGTACCAGAGGCAGAGCAGCCAGAGCCAGAGCCGGAGCCAGAAGAAGACATCACTATGCAGCAGGATTTGAACTCTGAGAGCATGCCGCCGCCGCCAGCGCCACCATTGCCTCCGGCTTCAATGATTGATGACAATGCTGATAATGATTCAGGAGCTCCGCAGTCTCAGGAGTTGGTTTGGGGGGAAATGGCTGCTTGGTTTAATGCAATTCCTGCAGCTTGGGGTCCTGGTAGTCCTGTGTGGGATGATTTGGACTCAAACAACAATCTTCTGTTTCAATCACAAATTCCATTTATGAATCACAATCAGCAAGAATTCAATGACGATGATGATCCTGAAGCTCATAGAACAATAGAAGGAGATAATAACAGAAAACCAGGTTCTTCTTCCTCTTCTTCTTGCCCTGTTAGACCCTTCTTCTGGAAGGATCAAGATTGA 1308 0.4549 MAASAARNSGKSTKGAVVEDSHHQRVIAESGSQQDLEMMMIDKGKGVERRQWKPVFDEASMSNRPHKKINQSPPSPSSSFLKQQEPPFSSSSSSSSSSRIVFPFAFEGSQTQNQAMQFPHQFGTTNMPLFHPPPPQIQPSQLPLHQNMISFGSQHQQHLQNLQYWSDTLNLSPRGRAMAMMNNRIGPDGRPLFSPSPPVPLNATKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPELFLNKDKDQSTKMAQDSSSSSASASKVPEAEQPEPEPEPEEDITMQQDLNSESMPPPPAPPLPPASMIDDNADNDSGAPQSQELVWGEMAAWFNAIPAAWGPGSPVWDDLDSNNNLLFQSQIPFMNHNQQEFNDDDDPEAHRTIEGDNNRKPGSSSSSSCPVRPFFWKDQD 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01786 435 MobiDBLite consensus disorder prediction 65 96 - -
Arst3g01786 435 MobiDBLite consensus disorder prediction 394 412 - -
Arst3g01786 435 MobiDBLite consensus disorder prediction 1 15 - -
Arst3g01786 435 FunFam Ethylene-responsive transcription factor 2 205 264 - -
Arst3g01786 435 ProSiteProfiles AP2/ERF domain profile. 206 263 IPR001471 GO:0003700|GO:0006355
Arst3g01786 435 MobiDBLite consensus disorder prediction 1 96 - -
Arst3g01786 435 MobiDBLite consensus disorder prediction 41 64 - -
Arst3g01786 435 Pfam AP2 domain 207 255 IPR001471 GO:0003700|GO:0006355
Arst3g01786 435 PRINTS Ethylene responsive element binding protein signature 229 245 IPR001471 GO:0003700|GO:0006355
Arst3g01786 435 PRINTS Ethylene responsive element binding protein signature 207 218 IPR001471 GO:0003700|GO:0006355
Arst3g01786 435 SUPERFAMILY DNA-binding domain 206 264 IPR016177 GO:0003677
Arst3g01786 435 SMART rav1_2 206 269 IPR001471 GO:0003700|GO:0006355
Arst3g01786 435 Gene3D AP2/ERF domain 206 264 IPR036955 GO:0003700|GO:0006355
Arst3g01786 435 MobiDBLite consensus disorder prediction 277 291 - -
Arst3g01786 435 MobiDBLite consensus disorder prediction 413 427 - -
Arst3g01786 435 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 21 374 - -
Arst3g01786 435 MobiDBLite consensus disorder prediction 388 435 - -
Arst3g01786 435 CDD AP2 205 265 IPR001471 GO:0003700|GO:0006355
Arst3g01786 435 MobiDBLite consensus disorder prediction 272 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01786 Arst-Chr3 20929122 20931552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01786 39 375 AP2-EREBP Transcription Factor Family AT4G28140 42.353 4.80e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Arst3g01786 AP2 2.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01786 - - adu:107477889 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01786 3 20929122 20931552 Arst3g01786 3 20929122 20931552 ECH