Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01716 ATGGAGTTTGACCTTGAAAATCCTCTAGACAACTCTCATGCTCTTCTCCAATGGGATGCTGTTGCTTCACTATTCCACATTGAATCTCAACACACTCCATCTCACACTTACTTTCACTCTCTCAAAGCTTCAAACTTTAACATCTCTGTTAGAAGGGAACTCATTTCTCTAATCTCCAAGTTTTCTTGCAGTTTGGATCCACTTGTCTCTTACCTTTCTATCAACTATCTAGACCGGTTCTTGTCCAACCATGGGATACTGAAACAAAAGGCATGGGCCCTTAGGCTGCTTGCAATTTCTTGCATTTCTTTAGCATCCAAGATGATAAAGCCAGGGTACTCTGCCATTGATACTCAGGCCCTTCTCATGAATGATGGTGGCATCATTTTTGAGACACAAACAATGCAAAGAATGGAAGGACTCATCTTGGGAGCATTGGAATGGAGAATGCGGTCCATTACCCCTTTCTCCTTCTTAACTTTCTTCATTACTTTAATATGTGTCAAACACCCAATGGAACAGGTTCTCAAGAAAAGAGTGGCTGAAATTATATTCAAGTCACAAGGAGAGATAAAGCTTTTGGAATTCAAGCCATCTATAATTGCCGCATCAGCACTTCTTTGTGCTTCTCATGAACTCTTTCCTTTTCAATACCAAAGCTTCTCAGCAGCAATATCCAATTGTTTATATGTAAAAAAAGAAAATATGGTGAAATGCTATAATGTGATACAAGAAGTGGTAGGAATGGAGATGGAAGAAGAGGAGTGTGTGATCAATGAAGTTTCAAGTTCAGGAACACCAGTGAATGTGTTAGACTTGGACCATAAGTTTTCACTGAGCTCAGAAAGTGAGAAAACCAATAATAATGGAGGAATGGCCATAGTAGTAGATGATGATGATGAAGAAGCCTTGCAAGAGAAGAAGGATTTCATCATCAACAAGAGAAGGAAGATGAATAATAATAACAACAATCAAACGGTCCATGTTTCTCGGATTGCACAATGCTGA 1008 0.3919 MEFDLENPLDNSHALLQWDAVASLFHIESQHTPSHTYFHSLKASNFNISVRRELISLISKFSCSLDPLVSYLSINYLDRFLSNHGILKQKAWALRLLAISCISLASKMIKPGYSAIDTQALLMNDGGIIFETQTMQRMEGLILGALEWRMRSITPFSFLTFFITLICVKHPMEQVLKKRVAEIIFKSQGEIKLLEFKPSIIAASALLCASHELFPFQYQSFSAAISNCLYVKKENMVKCYNVIQEVVGMEMEEEECVINEVSSSGTPVNVLDLDHKFSLSSESEKTNNNGGMAIVVDDDDEEALQEKKDFIINKRRKMNNNNNNQTVHVSRIAQC 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01716 335 Gene3D - 23 241 - -
Arst3g01716 335 FunFam D6-type cyclin 34 148 - -
Arst3g01716 335 Pfam Cyclin, N-terminal domain 21 150 IPR006671 -
Arst3g01716 335 SMART cyclin_7 52 144 IPR013763 -
Arst3g01716 335 SUPERFAMILY Cyclin-like 16 150 IPR036915 -
Arst3g01716 335 Gene3D - 34 151 - -
Arst3g01716 335 CDD CYCLIN_AtCycD-like_rpt2 153 243 - -
Arst3g01716 335 FunFam D6-type cyclin 149 241 - -
Arst3g01716 335 SMART Cyclin_C_2 153 270 IPR004367 -
Arst3g01716 335 Coils Coil 301 321 - -
Arst3g01716 335 Pfam Cyclin, C-terminal domain 153 252 IPR004367 -
Arst3g01716 335 PANTHER CYCLINS 24 247 IPR039361 -
Arst3g01716 335 SUPERFAMILY Cyclin-like 135 246 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01716 Arst-Chr3 19831186 19833320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01716 1 286 Core Cell Cycle Gene Families AT4G03270 44.966 4.12e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01716 K18812 - gmx:100820404 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01716 3 19831186 19833320 Arst3g01716 3 19831186 19833320 ECH
Arst8g02209 8 31016308 31018700 Arst3g01716 3 19831186 19833320 PCT