Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01711 ATGGTGAGAGCTCCTTTCTATGACAAATATGGAGTGAAGAAAGGTGCATGGAGTAGAGAAGAGGATCAAAGATTAATAGCTTTTGTTCAAAGATATGGTCATTCTAATTGGCGTCAGCTCCCAAAGTTTGCAGGTTTAGCAAGGTGTGGGAAAAGTTGCAGACTTCGCTGGTTGAATTACTTGAGGCCAAATCTAAAACATGGGAACTACACCCAAGAGGAAGAAGAATTAATAATCAAATTACACCAACAATTAGGAAATAGATGGTCTTTGATTGCTGAAAGACTTCCTGGAAGAACAGACAATGAAATAAAGAACCATTGGCATAGTCACCTCAAGAAGTTATCATCAAAAAACAACAATAATGAGATCAACCCATCATCTGAATCTGAATCTGAATCAAAATCAAACAACCCAATTGATGATGATATTCTTGAAGGAAAACATACCAATCAGCCTAAAGATTCTGTAAGTCCAAGTTATGATTATGTTGATAGTGCTAATAATAATAAATTCCAGCACCGTGTTCTAGAAAGTTCATCATCAACAGAAACTTCGTCATATACTGATGATGAAGTAGGTCACAGCTATTATTCTCTTACTCCCAATAATGTTGAACAATCAACAATAATGAATAACTCTCCAACATCAAGCGAAGATTATTGTGTGGTTCCGTCAGTATCATTTGAAGAATTTGGTGGAGATTTTTGGACTGAGCCATTCATAGTGGCAAATAATGATGCATATGCTAATGATGAGATAATAATAAGTGGTGAAGACGATGTTGGGTTTCTTGTTCCATACTTGTACGAGAGTGCAGATTTTTGTTTTAACTTGTAG 840 0.3583 MVRAPFYDKYGVKKGAWSREEDQRLIAFVQRYGHSNWRQLPKFAGLARCGKSCRLRWLNYLRPNLKHGNYTQEEEELIIKLHQQLGNRWSLIAERLPGRTDNEIKNHWHSHLKKLSSKNNNNEINPSSESESESKSNNPIDDDILEGKHTNQPKDSVSPSYDYVDSANNNKFQHRVLESSSSTETSSYTDDEVGHSYYSLTPNNVEQSTIMNNSPTSSEDYCVVPSVSFEEFGGDFWTEPFIVANNDAYANDEIIISGEDDVGFLVPYLYESADFCFNL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01711 279 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Arst3g01711 279 CDD SANT 69 112 IPR001005 -
Arst3g01711 279 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst3g01711 279 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 199 - -
Arst3g01711 279 FunFam MYB-related transcription factor 13 66 - -
Arst3g01711 279 CDD SANT 16 61 IPR001005 -
Arst3g01711 279 MobiDBLite consensus disorder prediction 114 199 - -
Arst3g01711 279 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Arst3g01711 279 MobiDBLite consensus disorder prediction 135 150 - -
Arst3g01711 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Arst3g01711 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Arst3g01711 279 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Arst3g01711 279 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst3g01711 279 SMART sant 13 63 IPR001005 -
Arst3g01711 279 SMART sant 66 114 IPR001005 -
Arst3g01711 279 Gene3D - 69 142 - -
Arst3g01711 279 MobiDBLite consensus disorder prediction 115 134 - -
Arst3g01711 279 Gene3D - 13 66 - -
Arst3g01711 279 MobiDBLite consensus disorder prediction 151 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01711 Arst-Chr3 19757024 19758831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01711 1 141 MYB Transcription Factor Family AT2G31180 60.959 7.76e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst3g01711 Myb_DNA-binding 3.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01711 K09422 - gmx:100781032 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02208 8 30955088 30957623 Arst3g01711 3 19757024 19758831 PCT