Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01710 ATGGTTAGAACACCTTCTTGTGACAAGAGTGGATTGAGGAAAGGTACTTGGACTCCTGAGGAAGATAGGAAGTTAATTGCCTATGTTACTAGGTATGGTAGCTGGAATTGGCGCCAATTGCCTAAGTTTGCAGGACTGGCTAGGTGTGGGAAAAGTTGTAGATTGAGGTGGATGAATTACCTAAGGCCTAATCTCAAAAGAGGGAACTTCACTCAAGAGGAAGAAGCTTGCATAATCAAATTGCATTCTAAACTTGGAAATAGATGGTCTGCCATTGCTGCGGAACTACCTGGAAGAACTGATAACGAAATCAAGAACCATTGGCACACCACACTCAAGAAGCGCTTCCAAACCAATGAAGAAGAATCCAAACCCAAAGAAACTACTCAGATCTCAGCAGAGAGCAACACTACTACTACTTCACCATTATCACCATTGTCATCTTCAAGTGAATTTTCCTCCAGAACTTCCTGGGATCAAAGTCACAATAATAATAATAATAATAAGAACAATCTGGTTCTTGAAGACGACGATTTCGCTTTTCTGGATGGAAGTTTCTGGACAGAACCATATCTTGCTGAAATCTTGCATGAACAAGAAACAGTAGTAACAGTGCCTAGTAGTACTAGCAATGTGTTTGATCCTTGTGAAATCTCAGTGGCCAATGAAAATGAAGAGTTGGAATTATCATCCAACAACAGTACGTCAAGTTTGTTTGATCTGGAGAAAGAGTTTGGGAGCTTCTTGATTGAACCAACAATGATGGAAAGTTTTTGGACCCAGCCATGTGTGTCTGAATCTGATGACGTGTCCCACATTCCTTTTATGCCTCCATCATCTGAATACTTTACAACGCTGTGTGGGTCAGATCCTTGGAGCACTCCAAGTACTACTCATTTGTATGATCAACATCTTAGCTTATTCCATTGA 930 0.4075 MVRTPSCDKSGLRKGTWTPEEDRKLIAYVTRYGSWNWRQLPKFAGLARCGKSCRLRWMNYLRPNLKRGNFTQEEEACIIKLHSKLGNRWSAIAAELPGRTDNEIKNHWHTTLKKRFQTNEEESKPKETTQISAESNTTTTSPLSPLSSSSEFSSRTSWDQSHNNNNNNKNNLVLEDDDFAFLDGSFWTEPYLAEILHEQETVVTVPSSTSNVFDPCEISVANENEELELSSNNSTSSLFDLEKEFGSFLIEPTMMESFWTQPCVSESDDVSHIPFMPPSSEYFTTLCGSDPWSTPSTTHLYDQHLSLFH 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01710 309 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Arst3g01710 309 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst3g01710 309 CDD SANT 69 112 IPR001005 -
Arst3g01710 309 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst3g01710 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Arst3g01710 309 CDD SANT 16 61 IPR001005 -
Arst3g01710 309 Gene3D - 6 67 - -
Arst3g01710 309 SMART sant 13 63 IPR001005 -
Arst3g01710 309 SMART sant 66 114 IPR001005 -
Arst3g01710 309 MobiDBLite consensus disorder prediction 129 170 - -
Arst3g01710 309 MobiDBLite consensus disorder prediction 115 170 - -
Arst3g01710 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Arst3g01710 309 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Arst3g01710 309 FunFam MYB-related transcription factor 13 66 - -
Arst3g01710 309 Gene3D - 69 140 - -
Arst3g01710 309 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Arst3g01710 309 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01710 Arst-Chr3 19708557 19709885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01710 1 189 MYB Transcription Factor Family AT2G31180 53.927 8.60e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst3g01710 Myb_DNA-binding 7.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01710 K09422 - gmx:778184 291.197