Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01706 ATGAGTCCATCTTTTGATGCTATTAGCAAGATAGTTCCTCCAAGAGAGGCTTGGAGGCTTAAAGTGAGGGTAATTAGGGCTTGGATTGTTCCAAGCTTTGGAAATCCAGATTCTCCAAATTCAATGGAGCTCATTTTGGTGGATGAAAATTCAAACAAAATCCAGGCCACTATAAGGAAGCAACTTATCAACAGGTTTAAAGATAATATTATTGAAGGGAATTGCTACAAGATGTGTTATTTCTCTGTTGTTCCAAATCATGGCTCTTATAGAGCTACAAAACATGAGTTTAAGCTTACATTCCTCTTCCGAACAATAGTAACAACTTTACCAGATGATATCATACCAAGAGTCTGTTTTACTCTATATCCTTTTGAGGAGATATTGCAAATGAGTCAAGATCATGATTATTTAGTTGATGTTATTGGGTTGCTGACTTTAGTTGGAGAGGAAAAAAGTTATGATAAAGATGGAAAAACAATCAAGATGGTTGTTGTGGAGCTTTCTTCTCAAAAGATGGTGCTTAGGTGCGCCCTGTTTGGAGAATATGTGGATCAACTAAATCATTTTCTTTCTTCTGGTTATGTTGAACAACCAGTAGTGATTCTTCAACTTGCCAAAGTTAAGCTTTTTCGAGGGCAACCTGGGTTACAAAATGTCATGAAAGCAACAAAAATATATCTTAATCCTGACTTGGCAGCTGTTGTTGATTTCAGGAAGAGCGTGGTAGAGCAAGGGATAAATGGGACCCAGCCACTGTTTATTGCTAATGAAGGAAAAACTATCTCATTGGAGGATGACTTCATGAGGTTGACTAAGAAATCTACAATAGATGAGTTGCAAGAAAACAAGGAGGATGGAACCTTTGTCATTTTAGGTACTATCACTGATGTTGTAGAAGAGGGGTGCTGGTGGTATTCTACCTGTGTTTGTGGGAAGACAGTACATCCTGAATCTGGTGTTTACTTTTGTGATATGTGCATGCATCATGTGACAAATGTGATCCCAAGATATTTTGGAACTTTTCGTGTGAAGAGGATTTGTGATGATGCTGCAATTATTTCAATGTTTGAACTTGCTCAGACTGAGATAACACCTTTGAAGGATGCACCTGTTCCTGTGTTTGGTCCTGAGTTGGGTGAAACTTCTAATACAAAATGTTTAGAGAATACTGTCATGTCATCTTTTCTTCAAAAAGAAGCAAATGTTGCTGGACTTGATGATATACACTTAGATATGGAAGGTGTTAAGGAGGTTGATATTCAAGATCATTCTGTTGATAGTGATGAAAATGTAGTGCTGTCGGATGATATTGGCTCACTTATTCGGTCTGATGTTGATGAAACTCAGGATTTGCTCTCACACCTTTTAGATGACTCAAGGAAAGTTAATGTGCCTAATGTTGTTCCCAAAGATGCAGTATTTTTAAAGGTGAAGAGGAATCTTGAGGCTGATTTTGATAAGGAACTTGAGGATACTGTTGCTCATTGCTCTAAAATAATCAAGATTGAAGATAGTTAA 1521 0.3734 MSPSFDAISKIVPPREAWRLKVRVIRAWIVPSFGNPDSPNSMELILVDENSNKIQATIRKQLINRFKDNIIEGNCYKMCYFSVVPNHGSYRATKHEFKLTFLFRTIVTTLPDDIIPRVCFTLYPFEEILQMSQDHDYLVDVIGLLTLVGEEKSYDKDGKTIKMVVVELSSQKMVLRCALFGEYVDQLNHFLSSGYVEQPVVILQLAKVKLFRGQPGLQNVMKATKIYLNPDLAAVVDFRKSVVEQGINGTQPLFIANEGKTISLEDDFMRLTKKSTIDELQENKEDGTFVILGTITDVVEEGCWWYSTCVCGKTVHPESGVYFCDMCMHHVTNVIPRYFGTFRVKRICDDAAIISMFELAQTEITPLKDAPVPVFGPELGETSNTKCLENTVMSSFLQKEANVAGLDDIHLDMEGVKEVDIQDHSVDSDENVVLSDDIGSLIRSDVDETQDLLSHLLDDSRKVNVPNVVPKDAVFLKVKRNLEADFDKELEDTVAHCSKIIKIEDS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01706 506 SUPERFAMILY Nucleic acid-binding proteins 120 242 IPR012340 -
Arst3g01706 506 Pfam Domain of unknown function DUF223 43 138 IPR003871 -
Arst3g01706 506 CDD RPA1_DBD_A_like 19 107 - -
Arst3g01706 506 Gene3D - 114 250 IPR012340 -
Arst3g01706 506 Gene3D - 6 112 IPR012340 -
Arst3g01706 506 Gene3D - 264 365 IPR012340 -
Arst3g01706 506 SUPERFAMILY Nucleic acid-binding proteins 275 343 IPR012340 -
Arst3g01706 506 CDD RPA1_DBD_B_like 140 242 - -
Arst3g01706 506 SUPERFAMILY Nucleic acid-binding proteins 4 113 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01706 Arst-Chr3 19622483 19626684 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01706 8 339 Core DNA Replication Machinery Family AT2G06510 20.057 6.16e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01706 - - ahf:112711209 650.588