Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01702 ATGGTGAGAACCCCTCATCGGTGTGAGAAAAGTGGAGTGAGGAAAGGAACATGGACACCTGAGGAAGATTCCAAGTTGATTGCTCATCTCACTACGTTTGGTCACCCCACCAATTGGCGCCAACTACCCGGAGCTGCAGGTCTTGCAAGGTGTGGAAAGAGCTGCAGATTAAGGTGGATGAATTACTTAAGGCCAGATGTCAAAAGAGGGAATTATACACAAGAAGAAGATGACACTATAGTCAAACTACACAATCAGTTTGGTAATAGATGGTCCATGATTGCGTCTCACTTACATGGAAGATCAGACAACGAGATAAAGAATCGGTGGCACTCCCAACTTAAGAAGCGATTCCAACACACTTCAGCCTCCAATTCAAATAATCATAATGCCTTAATTCAATCAACGGAAGAAGAGATAGTGAATAATAATCATAATAATAATGCCACTACAAATGAATACCCTTCTAGTAATCTTCACAACACTTCTCCAGCTTCTTCTCAAAGCGATACATATGACGATTTTTCTCCATTGAGTGACTTTTTCTACACACCTGCGGTGGATCTTGCTGCACCATTTGGTAATAACTCGGTTTTGGGTATTGATAATGATGATCACTATGCTAATTTTCTGGATAATATGGTACACAGTAACATAGTGCCAATTGGTGCAGATTATGTTTGGACTCAACAGGATTATTCAAGTCCAATCTATGAGATCCGCGTTGCTGTCTTTGTTCTTCGTTCGTCTCAGATCTATGTCGCTACGACAGAACTAGCATCACTTTTATCTTCAAAAGCATCGTCAATGGCGGAAAGGAAGTTCGGCGCAGAGGTTGAGGAGCTTCTTGACTGGATGCTCACTGCAAAATTCCAAGCTTGA 882 0.4172 MVRTPHRCEKSGVRKGTWTPEEDSKLIAHLTTFGHPTNWRQLPGAAGLARCGKSCRLRWMNYLRPDVKRGNYTQEEDDTIVKLHNQFGNRWSMIASHLHGRSDNEIKNRWHSQLKKRFQHTSASNSNNHNALIQSTEEEIVNNNHNNNATTNEYPSSNLHNTSPASSQSDTYDDFSPLSDFFYTPAVDLAAPFGNNSVLGIDNDDHYANFLDNMVHSNIVPIGADYVWTQQDYSSPIYEIRVAVFVLRSSQIYVATTELASLLSSKASSMAERKFGAEVEELLDWMLTAKFQA 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01702 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Arst3g01702 293 Gene3D - 70 151 - -
Arst3g01702 293 FunFam Transcription factor RAX3 8 69 - -
Arst3g01702 293 CDD SANT 71 111 IPR001005 -
Arst3g01702 293 CDD SANT 17 63 IPR001005 -
Arst3g01702 293 SUPERFAMILY Homeodomain-like 12 110 IPR009057 -
Arst3g01702 293 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 169 - -
Arst3g01702 293 Pfam Myb-like DNA-binding domain 15 63 IPR001005 -
Arst3g01702 293 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Arst3g01702 293 Gene3D - 6 69 - -
Arst3g01702 293 MobiDBLite consensus disorder prediction 144 171 - -
Arst3g01702 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 63 IPR017930 -
Arst3g01702 293 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Arst3g01702 293 ProSiteProfiles Myb-like domain profile. 10 63 IPR001005 -
Arst3g01702 293 SMART sant 14 65 IPR001005 -
Arst3g01702 293 SMART sant 68 116 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01702 Arst-Chr3 19529443 19532475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01702 1 140 MYB Transcription Factor Family AT1G06180 57.143 3.05e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst3g01702 Myb_DNA-binding 6.4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01702 K09422 - gmx:106799185 206.068