Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01690 ATGGTGAGAACCCCTCATCGGTGTGAGAAAAGTGGAGTGAGGAAAGGAACATGGACACCTGAGGAAGATTCCAAGTTGATTGCTCATCTCACTACGTTTGGTCACCCCACCAATTGGCGCCAACTACCCGGAGCTGCAGGTCTTGCAAGGTGTGGAAAGAGCTGCAGATTAAGGTGGATGAATTACTTAAGGCCAGATGTCAAAAGAGGGAATTATACACAAGAAGAAGATGACACTATAGTCAAACTACACAATCAGTTTGGTAATAGATGGTCCATGATTGCGTCTCACTTACATGGAAGATCAGACAACGAGATAAAGAATCGATGGCACTCCCAACTTAAAAAGCGATTCCAACACACTTCGGCCTCTAATTCAAATAATCATAATGCCTTAGTTGAATCAACGGAAGAAGAGATAGTGAATAATAAT 432 0.4259 MVRTPHRCEKSGVRKGTWTPEEDSKLIAHLTTFGHPTNWRQLPGAAGLARCGKSCRLRWMNYLRPDVKRGNYTQEEDDTIVKLHNQFGNRWSMIASHLHGRSDNEIKNRWHSQLKKRFQHTSASNSNNHNALVESTEEEIVNNN 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01690 144 Gene3D - 71 141 - -
Arst3g01690 144 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Arst3g01690 144 Gene3D - 6 69 - -
Arst3g01690 144 SUPERFAMILY Homeodomain-like 12 110 IPR009057 -
Arst3g01690 144 CDD SANT 71 111 IPR001005 -
Arst3g01690 144 CDD SANT 17 63 IPR001005 -
Arst3g01690 144 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 130 - -
Arst3g01690 144 FunFam Transcription factor RAX3 8 69 - -
Arst3g01690 144 Pfam Myb-like DNA-binding domain 15 63 IPR001005 -
Arst3g01690 144 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Arst3g01690 144 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 63 IPR017930 -
Arst3g01690 144 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Arst3g01690 144 ProSiteProfiles Myb-like domain profile. 10 63 IPR001005 -
Arst3g01690 144 SMART sant 14 65 IPR001005 -
Arst3g01690 144 SMART sant 68 116 IPR001005 -
Arst3g01690 144 MobiDBLite consensus disorder prediction 120 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01690 Arst-Chr3 19505088 19506554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01690 8 140 MYB Transcription Factor Family AT1G06180 58.647 3.83e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst3g01690 Myb_DNA-binding 1.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01690 K09422 - gmx:106799185 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01690 3 19505088 19506554 Arst8g02208 8 30955088 30957623 PCT