Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01685 ATGGTAACTTGTGACATGCCATATTGTTTCAACAACATGATGGAGCCATGCTTCTTGCTTTCTCTTTTCATCATCATATGCTTCTCTTTTCACCCTTACAATTCCCATGCAGCTTTGATTTCAATCACTGCAAACCAATCTCTCAGTGGTGATCAAACACTTGTCTCCAAAGATGAAAAATTTGAATTGGGTTTCTTCAAATCAGGTAACACCTCTAACTACTACATAGGAATGTGGTACAAAAAAAGAGTCTCACAAAGAACCTATGTTTGGGTAGCAAATAGAGATAACCCAGTTTCTGATAAAAATTCTGCAAAGTTGACAATATCTAAGGGTAATTTAGTACTCTTGGATCAGTCTCAAAATCAAGTTTGGTCAACAAATTTGAATTCTCCAAACTTAGATTCTATAGTAGCTGTGCTTCTAGATAATGGGAATCTTATACTGAGTGATAGGCCTAATCCATCAGAATCAAATTCTCTATGGCAAAGTTTTGATCATCCAACAGATACATTCCTTCCTGGAGCCAAACTTAAGCTTGACAAAAAAACTGGTAAACCTCAGTACCTAACTTCTTGGAAGAACACTCAAGATCCTGGAACAGGATTGTTCTCTTTGGAACTAGACCCTAAAGAAAGCAAAGCTTACTTGATCCTTTGGAACAAAACTGAAGAATATTGGACTAGTGGACCTTGGAATGGTCAAATTTTCAGCGGGGTGCCTGAAATGAGGTTGAATTATATCTACAATTTCTCCTTCCATGATGAACCTGATGAGGCTTACTTCACTTACACGGTATATAACTCTTCGATTCTTTCGCGGTTTGTGATGGATGTCTCTGGGCAGATCAAGCAGCTTTCATGGCTGGACAGTACACAGAATTGGAACTTGTTTTGGTCTGAGCCAAGAACGCAGTGTGAGGTTTACTCGTTCTGTGGCGTGTATGGGAGTTGTACTGAGAACTCTATGCCATTCTGCAGTTGCTTGACTGGTTATGAGCCAGGTAATCCATCTGACTGGTACCTAGAGGATTACTCAAGTGGATGCAAGAGAAGAACAAAGTTCCAATGCGAGACGGCGAATCCTAATGGTGGTGCAAAGGACAGGTTTATGGCATTTCCAAACATGGCATTGCCTTCACCTGCACAACATGTAAGTGCTGGGGATGCAGAGGAATGCGCTTCAACTTGCTTAGAGGACTGTTCTTGCACAGCATATGCATATGGTAATAAAGGTTGTGTAATTTGGAATGGTGACCTCTTGAATTTGCAGCAGCTTTCTCAAGATGATAGTAATGGAGAAACCATGTTTCTCAAGCTTGCAGCATCTGAATTTGATGATCCTAAGAGCAGCAAGAGGAGAACCATTGGTGCTGTTGCAGGTGCTGTTGGTGGCATGGTGATTGTCCTAGCACTTACTCTATTTGCCTTGGTGAGGAGAAGGAGACAAGTTCAATCAGGAACGTTGGTTGAAGGCTCATTGAAGACATTTGGATACAGAGATTTGCAAATTGCTACAATGAATTTCTCGGATAAATTGGGAGGAGGAAGTTTTGGTTCTGTCTTCAAGGGGACACTGCCAGATTCAAGTGTCATAGCAGTGAAGATGCTCGAAAACATTAGCCAAAGTGAGAAACAGTTCCGGACAGAAGTGAGCACAATTGGGATAGTCCAGCATATCAATCTGGTTAGGCTCCGTGGATTCTGTTCCGAAGGTACTAGAAAACTTCTAGTCTATGATTACATGCCAAATGGCTCCTTGGATTCAAACTTGTTTCATGAGAAGGGATTCAAGTCCAAGGTGTTGGAATGGAAAGAAAGGTACCAAATTGCTCTTGGGACAGCTAGAGGACTGGCTTATCTCCATGAGAAGTGTAGAGACTGCATCATACATTGCGATGTGAAGCCGGAAAACATTCTTTTAGATGCTGATTTTTGTCCAAAAGTGGCACATTTTGGCCTTGCAAAGCTGGTTGGAAGGGAAGTTGGCCAGGTCCTAACAACCATGAGAGGAACAAGGGGATACCTCGCGCCAGAATGGAATTCTGGGGTGCCTGTAACTGCCAAAGCCGATGTCTATAGCTATGGAATGATGCTGTTCGAGTTTGTGTCCGGTAAGAGGAACTCAGATCCCCCAGAAGATGGACAAGTTAGGTTCTTCCCTGCATGGGCTGCAAAAACAGCAAGCGAAGGCGGCAATGTGCTTAGCCTTTTGGATCCAAAGTTGAAGGGAAATGCTAACATCGAAGAGGTCATTCGAGTCATCAAAATCGCTTCTTGGTGTGTCCAAGACGATGAGACTCATAGGCCATCCATGAGTCAGGTAGTTCACATCCTAGATGGTGTGTTGGATGTGGCTTTTCCTCCTGTGCCAATATTCCTACAAGCCTTTCTTGAGAACCAAGAAACTACGGTTTTCTTCATTGAATCAGGCTCTAATCAGAGTTCACATATGAAAAGCTCCACAACCTCCTCTTAG 2478 0.4257 MVTCDMPYCFNNMMEPCFLLSLFIIICFSFHPYNSHAALISITANQSLSGDQTLVSKDEKFELGFFKSGNTSNYYIGMWYKKRVSQRTYVWVANRDNPVSDKNSAKLTISKGNLVLLDQSQNQVWSTNLNSPNLDSIVAVLLDNGNLILSDRPNPSESNSLWQSFDHPTDTFLPGAKLKLDKKTGKPQYLTSWKNTQDPGTGLFSLELDPKESKAYLILWNKTEEYWTSGPWNGQIFSGVPEMRLNYIYNFSFHDEPDEAYFTYTVYNSSILSRFVMDVSGQIKQLSWLDSTQNWNLFWSEPRTQCEVYSFCGVYGSCTENSMPFCSCLTGYEPGNPSDWYLEDYSSGCKRRTKFQCETANPNGGAKDRFMAFPNMALPSPAQHVSAGDAEECASTCLEDCSCTAYAYGNKGCVIWNGDLLNLQQLSQDDSNGETMFLKLAASEFDDPKSSKRRTIGAVAGAVGGMVIVLALTLFALVRRRRQVQSGTLVEGSLKTFGYRDLQIATMNFSDKLGGGSFGSVFKGTLPDSSVIAVKMLENISQSEKQFRTEVSTIGIVQHINLVRLRGFCSEGTRKLLVYDYMPNGSLDSNLFHEKGFKSKVLEWKERYQIALGTARGLAYLHEKCRDCIIHCDVKPENILLDADFCPKVAHFGLAKLVGREVGQVLTTMRGTRGYLAPEWNSGVPVTAKADVYSYGMMLFEFVSGKRNSDPPEDGQVRFFPAWAAKTASEGGNVLSLLDPKLKGNANIEEVIRVIKIASWCVQDDETHRPSMSQVVHILDGVLDVAFPPVPIFLQAFLENQETTVFFIESGSNQSSHMKSSTTSS 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01685 825 Pfam S-locus glycoprotein domain 227 334 IPR000858 GO:0048544
Arst3g01685 825 Gene3D Transferase(Phosphotransferase) domain 1 582 786 - -
Arst3g01685 825 ProSiteProfiles Bulb-type lectin domain profile. 39 162 IPR001480 -
Arst3g01685 825 Pfam PAN-like domain 366 422 IPR003609 -
Arst3g01685 825 SMART ntp_6 365 440 IPR003609 -
Arst3g01685 825 ProSiteProfiles Protein kinase domain profile. 507 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01685 825 FunFam Receptor-like protein kinase 4 475 581 - -
Arst3g01685 825 CDD PAN_AP_plant 363 441 - -
Arst3g01685 825 SMART blect_4 45 168 IPR001480 -
Arst3g01685 825 ProSitePatterns Protein kinases ATP-binding region signature. 513 535 IPR017441 GO:0005524
Arst3g01685 825 SUPERFAMILY Protein kinase-like (PK-like) 494 814 IPR011009 -
Arst3g01685 825 Pfam Protein kinase domain 510 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01685 825 PIRSF SRK 11 825 IPR024171 GO:0004674
Arst3g01685 825 Gene3D Phosphorylase Kinase; domain 1 473 581 - -
Arst3g01685 825 CDD B_lectin 45 168 IPR001480 -
Arst3g01685 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 582 789 - -
Arst3g01685 825 CDD TM_EGFR-like 454 483 - -
Arst3g01685 825 FunFam Serine/threonine-protein kinase 34 165 - -
Arst3g01685 825 SMART serkin_6 507 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01685 825 ProSiteProfiles PAN/Apple domain profile. 357 441 IPR003609 -
Arst3g01685 825 Pfam D-mannose binding lectin 88 194 IPR001480 -
Arst3g01685 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 233 IPR036426 -
Arst3g01685 825 SUPERFAMILY Hairpin loop containing domain-like 366 427 - -
Arst3g01685 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Arst3g01685 825 CDD STKc_IRAK 513 781 - -
Arst3g01685 825 Gene3D - 36 166 IPR036426 -
Arst3g01685 825 PANTHER OS07G0415500 PROTEIN 19 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01685 Arst-Chr3 19418497 19421180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01685 448 785 Receptor kinase-like Gene Family AT1G56120 43.353 2.38e-68 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst3g01685 Pkinase 9.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01685 - - ahf:112789715 1268.06