LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst3g01659	ATGGAGTTGACAAGACCTGGCTATGCCGTAATTTATGTCATTCTACTTTGCGCATTGGCACAAGGGGGCTCAGAGGGGAAGAGGGGCGAGGACGATGATTTTTCTCCATCATCGTTACTTGTACACACAACACAACAGGCCGAGATAGTGCCAAAACATAGAAAAGAATTGACAAAGAACATTGAAGGCAAAGAGTTGGACTTACATGCAAAAGAAGAGAGCAATGACATTAGGCCAATACTTTTCAGACAAAACAACACAAACAAAGCAACAAAATCAAACCAAACTATTGATCCACCAACACCACAACCACAGTCATCGCCACCGCGACGATCTCATCGGCTCCTTGCCGCTTCTAGATCTCTAACAGAGAGTAGTGATCCTGTAACTTCTCCTCCACCTAATAAAAATGAAGATGACAAACAACCAAAAACGACGGTTCATGGTGCTGCTGCTGTATCAGGAATTCTAATGGCACTTGGGGTGTCCTTTTGCTATAGACAGGTCAAAACCAACAAAGAGGAAAAAGAAGATATACTAATATTAACCTCAAAGGATTATGCTGGCGGTTCACCAAAGATTGTTCGTTTGGGAGATAATACTGAACTTAACAAGCATAATAAGGAAGAAGAATCTGTTACAGATAACAATGAAAAGAAAACTTCTGATGATGATGCTAAGAATGAAGGTAGCAACACTACCTCAGAAGTTGAGACAACAGCACCATTACAAGTTGTGGAACATGTAGTTGAATTTGCACCAGGCCCACCACAACCACCACCACCGCCACCAACTCGATCAGCTCCACTACCTCCCCCGGCCCCACGGGCCCCTCCACCGCCGGTCCCCCCACGGGGCCACGGTCCGCCACCACCACCGCCTCCAAGGCTACCCGGTAAGGGCCCTCGGGCGCCACCGCCGCCGCCTTTAAGAGGAGGGCGAGGAACAAGTCATCCTCCACCTGTTCCTTCAAGACCGTTGTCTAAAAGATTTAGAAATGTTGCTAGAGTAGATAGCTTTACTGAGGTCCCTGATCCTGCAAAGCCTAAACTAAAGCCATTTTTCTGGGACAAGGTTAATGCAAAATCTGATCAAGCAATGGTGTGGCACAAAATCAGCGGAGGTTCATTCGTATTCAATGAGGAACAGATGGAGTTTCTATTTGGTTGCGCAAACCATAACAAAAATGAACGCAAAAAGGATTCACCACAAATTGATACAGCACAACTTGTTCAGATTATTGACAAGAAAAAAGCACAGAATTTGTCAATTCTTTTGAAAGCTTTGAATGTGACAACAGAGGAAGTTGTTGATGCCATTAAAGAAGGTAATGAGCTTCCTATTGAGCTCATGCAGACACTGGTGAAGATGGCGCCGACATCCGACGAAGAATTGAAGCTTAGGTTATATACAGGACCCCTTTCTGATCTTGGCCCTGCAGAGAAGTTTCTCAAAGTCTTGGTTGATATTCCATTTGCTTTCAGACGCATTGAATGTTTGATTTTCATGTGTACCCTTCAAGAAGAGTCCTCAACTATGAGGGAGTATTTCACAACATTAGAGGTTGCTTGCAAGAAACTTGTAAAAAGTAGGCTATTCTTGAAGCTTCTAGAAGCAGTTCTTAAAACCGGCAACCGAATGAACGACGGAACGTACCGCGGCGGCGCGCAAGCATTCAAGCTGGACACACTCTTGAAGCTATCAGACGTGAAAGGAACAGATGGGAAGACGACGCTGCTGCACTTCGTTGTTCAAGAAATCATTCGATCCGAGGGAGTTAGAGCTCTAAGAACGGCGAAAGAAAGCGGAAGCATGCCAAACTTGGAAACAGAGGATTCTTCTGAAGAAAACTACCGAAGCCTCGGCATTGAAGTAGTTTCAGGCCTAAGCACTGAGCTATTGGACGTGAGAATGGCGGCGTTAATAGACGGCGATTTGATCAGTTCTACGGTGGCGAAACTCAGCCACTCGCTTTCCAAGACTCGAGAGTTTCTTGACACCGAGATGAAGAACGTTCAAGAAGACGGCGAGTTCCGATCTTGCATGGAGAGGTTTCTGGAGAAGGCGACATCGGAAGTGGCTTGGTTGATTGAGGAGGAGAAGAGGATAACGGAACTTGTTAAGGGAACTGCAGATTATTTTCACGGTAATTCAGGGAAAGAAGAAGGGCTTAGATTGTTCGCCGTTGTCCGCGATTTCTTGTTCATATTGGATAAGGTGTGCAAGGAGGTGAAGGAAACAAACGTTAAAGAGGCAAAGATTAATGCTGCTTCAAAGATTAATAATAATAACAATAATAATAGTAATGTTAAAGAGTCTTCACCATCAGTGACGCCGTCTTCTACCACGGAAGCTCAACAGCAAAATTCAGGGCCTTCTGAACTTCATAGGAGATTGTTTCCTGCTATTGTCCAGAGGAGAGTGGATGATGATTCTAGCTCTGATGATGACTACGACGATGATGACGATAATAACAAAATTTCTCCATAA	2490	0.4462	MELTRPGYAVIYVILLCALAQGGSEGKRGEDDDFSPSSLLVHTTQQAEIVPKHRKELTKNIEGKELDLHAKEESNDIRPILFRQNNTNKATKSNQTIDPPTPQPQSSPPRRSHRLLAASRSLTESSDPVTSPPPNKNEDDKQPKTTVHGAAAVSGILMALGVSFCYRQVKTNKEEKEDILILTSKDYAGGSPKIVRLGDNTELNKHNKEEESVTDNNEKKTSDDDAKNEGSNTTSEVETTAPLQVVEHVVEFAPGPPQPPPPPPTRSAPLPPPAPRAPPPPVPPRGHGPPPPPPPRLPGKGPRAPPPPPLRGGRGTSHPPPVPSRPLSKRFRNVARVDSFTEVPDPAKPKLKPFFWDKVNAKSDQAMVWHKISGGSFVFNEEQMEFLFGCANHNKNERKKDSPQIDTAQLVQIIDKKKAQNLSILLKALNVTTEEVVDAIKEGNELPIELMQTLVKMAPTSDEELKLRLYTGPLSDLGPAEKFLKVLVDIPFAFRRIECLIFMCTLQEESSTMREYFTTLEVACKKLVKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGVRALRTAKESGSMPNLETEDSSEENYRSLGIEVVSGLSTELLDVRMAALIDGDLISSTVAKLSHSLSKTREFLDTEMKNVQEDGEFRSCMERFLEKATSEVAWLIEEEKRITELVKGTADYFHGNSGKEEGLRLFAVVRDFLFILDKVCKEVKETNVKEAKINAASKINNNNNNNSNVKESSPSVTPSSTTEAQQQNSGPSELHRRLFPAIVQRRVDDDSSSDDDYDDDDDNNKISP	829

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst3g01659	829	MobiDBLite	consensus disorder prediction	25	46	-	-
	Arst3g01659	829	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	341	763	IPR015425	-
	Arst3g01659	829	Gene3D	Formin, FH2 domain	347	774	IPR042201	-
	Arst3g01659	829	MobiDBLite	consensus disorder prediction	108	136	-	-
	Arst3g01659	829	MobiDBLite	consensus disorder prediction	759	794	-	-
	Arst3g01659	829	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	409	763	-	-
	Arst3g01659	829	MobiDBLite	consensus disorder prediction	189	330	-	-
	Arst3g01659	829	MobiDBLite	consensus disorder prediction	69	147	-	-
	Arst3g01659	829	MobiDBLite	consensus disorder prediction	199	231	-	-
	Arst3g01659	829	MobiDBLite	consensus disorder prediction	253	326	-	-
	Arst3g01659	829	PANTHER	FORMIN-RELATED	79	815	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Arst3g01659	829	SMART	it6_source	341	752	IPR015425	-
	Arst3g01659	829	MobiDBLite	consensus disorder prediction	79	100	-	-
	Arst3g01659	829	Pfam	Formin Homology 2 Domain	344	735	IPR015425	-
	Arst3g01659	829	MobiDBLite	consensus disorder prediction	759	829	-	-
	Arst3g01659	829	Coils	Coil	54	74	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst3g01659	Arst-Chr3	18988630	18994446	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst3g01659	345	809	FH2 protein (formin) Gene Family	AT5G54650	58.316	3.13e-179	537

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst3g01659	-		-	ahf:112737572	938.332