Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01641 ATGAGATTTGAGAGGATCATGGAATTTGAAACACTATGTGAGTGCTGTGGGGTTGCAAGAGCCATTGTTTATTGCAAATCAGATTCTGCACGTTTGTGCATGGATTGTGATGTGTCCGTACACAGTGCAAATTGTTTATCTATGAGGCACCTTCGTTCTCTCTTATGTGACAGGTGCAATTCCGAAGCAGCAATTGTTCATTGCATTGAGGAAAAGTTGTCATTTTGCCAAGGTTGTTGTGAATTGAACCAAAATGGGTGTTCAATTTTGGGACACAGGCTTCAATCCTTGAATTGTTACAAAGGTTGTCCCAATTTCACTGATTTGCCTGGCTTGTTCTCCTTTGTTCTCGATGATTATTCCTGTTCAAGTGGTTTGGACCATAATGGTGGCGGCAGCGGATCAATTGACACATCATTGCCTAGAAGTGAAAGCTGCAATAGCAAGTGTTTGGAGCAGCTTGTTAACACTATTAACAATGATGGCAATTTCGGTTTTGTTAATGAAAAGTTGAAGGAAACAGAATACTCTGGTGACCAAGCAATCTTCCTTCCAAACCTTCCAAAGCTGCAGGAATGTCCAAATTTGAACGATCTAGGAATCCATGATGGTGATGGTCTCAACATGGATAATTTTCAATTTAACTTTGAAAACACTGATGAAATATTTGACTATTCTCAAATTGATACAACATACCAAGTTGTTAATGGAGGAATGGACTGTGAATTAATGGGAAATAACATATCAGCAACAGAATCTAATGCTCTTTTCGAGAGTACAATAGAGGCTGGTGGATCAGCTAGCGAGATGTATGGAATCAACAGCAATGAGAATTGTGTGCTTATGCCTCCTAGCTGCAATGAAAACAGCAATCTGGGATTCTCAAAGGGTGGTCAACTCTATTCAAGCATGTCACTTCCACTTCCTAACGGCGAGAGTGAAATTGGTGCTACAGATTATCAAGATTCTGGTTTGTCATCGATGTTCCCGATGGGTGATTTGTCTATGGAACCAATCTCAAAGGGTACATGCCAGCAAGCTCGGGAGAAAGCAAAATTGAGATTAAATGAGAAAAAGAAAAATCTAAGGTTTGGTAAGCAAATAAGATATGAATCTCGCAAAGCAAGGGCTGATTCGAGAAAACGTGTGAAAGGTAGATTTGTGAAAGCAGGCGAAGCATATGATTACGATCCTAAGAAGACAAGGAGCCTCTAA 1215 0.4008 MRFERIMEFETLCECCGVARAIVYCKSDSARLCMDCDVSVHSANCLSMRHLRSLLCDRCNSEAAIVHCIEEKLSFCQGCCELNQNGCSILGHRLQSLNCYKGCPNFTDLPGLFSFVLDDYSCSSGLDHNGGGSGSIDTSLPRSESCNSKCLEQLVNTINNDGNFGFVNEKLKETEYSGDQAIFLPNLPKLQECPNLNDLGIHDGDGLNMDNFQFNFENTDEIFDYSQIDTTYQVVNGGMDCELMGNNISATESNALFESTIEAGGSASEMYGINSNENCVLMPPSCNENSNLGFSKGGQLYSSMSLPLPNGESEIGATDYQDSGLSSMFPMGDLSMEPISKGTCQQAREKAKLRLNEKKKNLRFGKQIRYESRKARADSRKRVKGRFVKAGEAYDYDPKKTRSL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01641 404 SMART bboxneu5 8 55 IPR000315 GO:0008270
Arst3g01641 404 Pfam CCT motif 348 390 IPR010402 GO:0005515
Arst3g01641 404 CDD Bbox1_BBX-like 12 55 - -
Arst3g01641 404 ProSiteProfiles CCT domain profile. 348 390 IPR010402 GO:0005515
Arst3g01641 404 ProSiteProfiles Zinc finger B-box type profile. 8 55 IPR000315 GO:0008270
Arst3g01641 404 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 8 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01641 Arst-Chr3 18209337 18213532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01641 9 398 C2C2-CO-like Transcription Factor Family AT3G21880 40.302 6.86e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst3g01641 CCT 1.7e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01641 - - ahf:112737556 807.364