Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01617 ATGATGTCACACATCTTCATGGCAAAACAGAATAGCTGGTTTGGGTGGGTGAAGAGGTTATTCACATCTGAGTCAAACAACAAAAAACCAAAGAAATGGGGATGGGGACTTGGAAGGCTAAAGGGGAAACAACAGTACCCAAAAATCACTGCTCCAAGAAGAGCATTGATTGAAGCAAGTGCAGAGCAAAGAAAGCATGCATTGACAGTGGCAATTGCAACTGCAGCTGCGGCCGAGGCTGCAGTTGCGGCTGCACATGCTGCTGCCGAGGTTGTCAAGCTCACCGGTGGTTCTTGCTCTTATTCGTTCTTGGCCAAAGGTGATCGGAGCCTCGCCGCCATCAAGATTCAAAGCGCTTACCGCGCACATCTCGCAAGGAAAGCATTAAGAGGACTGAAGGGAGTGACAAAACTGCAAGCTCTCATTCGTGGTCAAGCAGTGAGACGTCGAGTGTCCAGGGCTTTGAAGAATTCGGCCACCAGTGCAGTTAAAATCCCGGAAACAATCAGCCAAATAGAAGAAAGGTACAGAAAAGACCAGATAATTTCTTTTGCAAAGCAAAAGAACAAGTTACATGAAAAAGAATTGAAGCTACAGCCAGAAGGGCATAGACATAGTCCAATAAGTTGGGATTCTAGGTTGCAGTCAAGAGAAGATATTGAAGCCACATGGTTGAGAAAGCAAGAGGCCGCTGCCAAAAGAGAACGCATGAAGCAATATTCCTTTTCACAAAGGGAAAGAAAACTTCCCCAAATGAGTGAAGAATCTGTTCACAACAAGGAATATAAAAACGAGAGAATCCGCACTTTAGGCCAATGGCTAAATAAGGAAGCCGATGACTCGAATACACACCACCATAAACAAGATCATCCCTCGAACTTTATTACAAGAGAAGCACATCAAGGACTCAGCCCGCAAATTTCGATTCCCCGGAGATCATTTTCGCATACAAAAAGATGTTCGGTTGGAGCTATTGATATCTCCCTACCGAATTCTCCGGTCCTTCCAACTTACATGGCCGTGACTGAATCCAGCAAAGCGAAGGCGAGATCTATGAGCACGCCACGGCTAAGAACAGGGTATTTGGACACATGCTCCAACAAGAGCGAGTCTCGGAAATAA 1122 0.4572 MMSHIFMAKQNSWFGWVKRLFTSESNNKKPKKWGWGLGRLKGKQQYPKITAPRRALIEASAEQRKHALTVAIATAAAAEAAVAAAHAAAEVVKLTGGSCSYSFLAKGDRSLAAIKIQSAYRAHLARKALRGLKGVTKLQALIRGQAVRRRVSRALKNSATSAVKIPETISQIEERYRKDQIISFAKQKNKLHEKELKLQPEGHRHSPISWDSRLQSREDIEATWLRKQEAAAKRERMKQYSFSQRERKLPQMSEESVHNKEYKNERIRTLGQWLNKEADDSNTHHHKQDHPSNFITREAHQGLSPQISIPRRSFSHTKRCSVGAIDISLPNSPVLPTYMAVTESSKAKARSMSTPRLRTGYLDTCSNKSESRK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01617 373 ProSiteProfiles IQ motif profile. 109 137 IPR000048 GO:0005515
Arst3g01617 373 ProSiteProfiles IQ motif profile. 133 160 IPR000048 GO:0005515
Arst3g01617 373 MobiDBLite consensus disorder prediction 346 373 - -
Arst3g01617 373 Pfam IQ calmodulin-binding motif 112 130 IPR000048 GO:0005515
Arst3g01617 373 Pfam IQ calmodulin-binding motif 133 150 IPR000048 GO:0005515
Arst3g01617 373 SMART iq_5 132 152 IPR000048 GO:0005515
Arst3g01617 373 SMART iq_5 108 130 IPR000048 GO:0005515
Arst3g01617 373 MobiDBLite consensus disorder prediction 235 261 - -
Arst3g01617 373 MobiDBLite consensus disorder prediction 346 366 - -
Arst3g01617 373 Gene3D - 108 161 - -
Arst3g01617 373 PANTHER IQ-DOMAIN 5-RELATED 10 366 - -
Arst3g01617 373 Pfam Protein of unknown function (DUF4005) 317 359 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01617 Arst-Chr3 17598807 17602367 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01617 7 364 IQD Protein Family AT5G03960 42.204 5.98e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01617 - - aip:107625415 669.463