Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01616 ATGATGTCACACATCTTCATGGCAAAACAGAATAGCTGGTTTGGGTGGGTGAAGAGGTTATTCACATCTGAGTCAAACAACAAAAAACCAAAGAAATGGGGATGGGGACTTGGAAGGCTAAAGGGGAAACAACAGTACCCAAAAATCACTGCTCCAAGAAGAGCATTGATTGAAGCAAGTGCAGAGCAAAGAAAGCATGCATTGACAGTGGCAATTGCAACTGCAGCTGCGGCCGAGGCTGCAGTTGCGGCTGCACATGCTGCTGCCGAGGTTGTCAAGCTCACCGGTGGTTCTTGCTCTTATTCGTTCTTGGCCAAAGGTGATCGGAGCCTCGCCGCCATCAAGATTCAAAGCGCTTACCGCGCACATCTCGCAAGGAAAGCATTAAGAGGACTGAAGGGAGTGACAAAACTGCAAGCTCTCATTCGTGGTCAAGCAGTGAGACGTCGAGTGTCCAGGGCTTTGAAGAATTCGGCCACCAGTGCAGTTAAAATCCCGGAAACAATCAGCCAAATAGAAGAAAGGTACAGAAAAGACCAGATAATTTCTTTTGCAAAGCAAAAGAACAAGTTACATGAAAAAGAATTGAAGCCAGAAGGGCATAGACATAGTCCAATAAGTTGGGATTCTAGGTTGCAGTCAAGAGAAGATATTGAAGCCACATGGTTGAGAAAGCAAGAGGCCGCTGCCAAAAGAGAACGCATGAAGCAATATTCCTTTTCACAAAGGGAAAGAAAACTTCCCCAAATGAGTGAAGAATCTGTTCACAACAAGGAATATAAAAACGAGAGAATCCGCACTTTAGGCCAATGGCTAAATAAGGAAGCCGATGACTCGAATACACACCACCATAAACAAGATCATCCCTCGAACTTTATTACAAGAGAAGCACATCAAGGACTCAGCCCGCAAATTTCGATTCCCCGGAGATCATTTTCGCATACAAAAAGATGTTCGGTTGGAGCTATTGATATCTCCCTACCGAATTCTCCGGTCCTTCCAACTTACATGGCCGTGACTGAATCCAGCAAAGCGAAGGCGAGATCTATGAGCACGCCACGGCTAAGAACAGGGTATTTGGACACATGCTCCAACAAGAGCGAGTCTCGGAAATAA 1116 0.457 MMSHIFMAKQNSWFGWVKRLFTSESNNKKPKKWGWGLGRLKGKQQYPKITAPRRALIEASAEQRKHALTVAIATAAAAEAAVAAAHAAAEVVKLTGGSCSYSFLAKGDRSLAAIKIQSAYRAHLARKALRGLKGVTKLQALIRGQAVRRRVSRALKNSATSAVKIPETISQIEERYRKDQIISFAKQKNKLHEKELKPEGHRHSPISWDSRLQSREDIEATWLRKQEAAAKRERMKQYSFSQRERKLPQMSEESVHNKEYKNERIRTLGQWLNKEADDSNTHHHKQDHPSNFITREAHQGLSPQISIPRRSFSHTKRCSVGAIDISLPNSPVLPTYMAVTESSKAKARSMSTPRLRTGYLDTCSNKSESRK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01616 371 ProSiteProfiles IQ motif profile. 109 137 IPR000048 GO:0005515
Arst3g01616 371 Pfam Protein of unknown function (DUF4005) 315 357 IPR025064 -
Arst3g01616 371 ProSiteProfiles IQ motif profile. 133 160 IPR000048 GO:0005515
Arst3g01616 371 PANTHER IQ-DOMAIN 5-RELATED 10 364 - -
Arst3g01616 371 Pfam IQ calmodulin-binding motif 112 130 IPR000048 GO:0005515
Arst3g01616 371 Pfam IQ calmodulin-binding motif 133 150 IPR000048 GO:0005515
Arst3g01616 371 Gene3D - 108 162 - -
Arst3g01616 371 MobiDBLite consensus disorder prediction 343 364 - -
Arst3g01616 371 SMART iq_5 132 152 IPR000048 GO:0005515
Arst3g01616 371 SMART iq_5 108 130 IPR000048 GO:0005515
Arst3g01616 371 MobiDBLite consensus disorder prediction 233 259 - -
Arst3g01616 371 MobiDBLite consensus disorder prediction 343 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01616 Arst-Chr3 17598807 17602367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01616 7 362 IQD Protein Family AT5G03960 42.473 8.27e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01616 - - aip:107625415 660.988