Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01596 ATGGATAACTATTTGAAGGAGTTCGAATTGGAACCGAAAGATCGTTCCATTGAAGCACTGAGTAGATGGAGATCTGCGGTCTCAGCCTGGGTCATCAAGAACCGCCGCAGGAGGTTCCGCAATGTTGTAGATCTCGTTAAACTAACACTTGCCGAGGAGAAGAAGAAGAAAATACAGCATAAACTAAGGAGCATTCGGGTTGTTGTCCAAGTTCATCGGGCAAAAGATCTTTTAAAGAATGCTATTAGTTCAGCAGTTGAATACGAGCTATCGGAAAAGACAAGAGAATCTGGTTTCAGAATTGAACCAGATGATATAGCAACGCTTGTTTCTGCCCATGATCTAAAGAACTTTAAAAAAATCGGCAGAGCTGAAGGGATTGCGAGGAAACTCTCAGTCTCTGTGAACGATGGTGTTAGTCAAGATAGTATACATAATAGGCAACAAATTTATGGACTTAACCGCTACACGGAGAGACCTTCAAAATCTTTCTTGATGTTTGTTTGGGAGGCATTGCATGACTTAACACTAATCATTCTCATAGTTTGTGCTCTAGTTTCTATAGCTATAGGGCTTCCCACTGAAGGATGGCCAAAGGGTGTTTATGATGGTCTTGGTATCATACTTAGTGTGTTTTTGGTTGTTACTGTTACTGCTATTAGTGACTACCAGCAATCCTTGCAATTCAGGGATTTGGACAAAGAGAAGAAAAAGCTCTTTGTCCAGGTGACCAGGGATGGGAAGAGACAGAAGGTTTCTATTTACGATTTGGTAGTCGGAGATATTGTCCATTTGTCAACTGGTGATCAAGTTCCAGCTGATGGAGTTTTTGTAACTGGATACTCATTACTAATTGATGAATCAAGTTTGTCAGGTGAGAGTGAACCAGTAAATATAGATGAACAAAAACCTTTTCTTCTTGCGGGAACCAAAGTGCAGGATGGTCAGGGAAAGATGATAGTTACAACAGTTGGCATGAGGACTGAATGGGGGAAGTTGATGGAAACTTTAAGTGAGGGAGGTGAGGAGGAGACTCCATTGCAAGTGAAATTGCATGGAGTTGCAACAATTATTGGGAAAATTGGGTTGGCTTTTGCCGTGTTGACATTTATCGTGTTGACAATAAGGTTTCTTGTTGAGAAAGCAGTCTCTGGTGACTTTAGTAGTTGGTCTATGAATGATGCAATGAAACTGCTGGACTACTTTGCTATTGCAGTGACCATAATAGTTGTCGCAATTCCGGAAGGATTACCATTAGCTGTGACACTTAGTCTTGCTTTTGCAATGAAAAAATTAATGAATGACAAGGCACTTGTGAGACATCTTTCCGCATGTGAGACTATGGGTTCTGCAAGTTGCATTTGCACAGACAAGACAGGAACATTGACCACTAACCATATGGTTGTGAACAAGATTTGGGTATGCGAAAAAGAGGCCGAGATCAAAGGTAATGAGAGTGCAGAGAAGCTGAAAACAGAGATACCTGAGGAAGTAATGAACATCCTTTTGCAGGCTATATTTCAAAATACATCTTCTGAAGTAGTTAAGGATGAAACCGGTAATAACACAATATTGGGAACACCAACAGAATCAGCATTGTTGGAATTTGGTTTGCTCACAGGTGGTGATTTTGATGCACAGCGCAGTACCTATAAGATAATTAAGGTTGAGCCTTTCAATTCAGTTCGGAAGAAGATGTCTGTGCTTGTGAGTCTTCCTAATGGAGGAGTCAGAGCTTTCTGCAAAGGAGCATCAGAAATAATACTAAGAATGTGTGACAAAATTATTGATTCTAATGGAAATGCTGCTGATCTTCCTGAAGAACAGGCGAAAAAAGTTAATGATGTCATAAATAATTTTGCCTCTGAAGCTCTGAGAACTCTTTGTTTGGCTGTTAAAGATATAGACGCAACAGAAGGGGAAAGCAGTATCCCTGATCATGGCTATACTCTGATAGCAATTGTAGGAATCAAGGATCCTGTGCGGCCCGGGGTCAGGGAAGCTGTTCAAACTTGTTTAGCAGCTGGAATAACCGTCCGTATGGTGACCGGTGATAACATCAATACAGCTAGAGCCATAGCTAAAGAATGTGCTATACTCACCGAGGGTGGTGTAGCTGTAGAAGGACCAGAGTTTCGAAACTTGTCGCCGGAGCAAATGAGAGATATCATACCAAATATTCAGGTAATGGCACGTTCCCTACCGCTTGACAAGCACACTTTAGTATCCAATTTGAGGAATATGTTTGGTGAGGTTGTAGCTGTAACTGGTGATGGAACCAATGATGCTCCTGCACTGCATGAGGCAGACATTGGACTTGCCATGGGGATCGCTGGAACTGAGGTTGCCAAAGAAAATGCTGATGTGATTATAATGGATGATAACTTCACTACTATCGTTAACGTGGCCAAATGGGGACGTGCCATATACATAAACATACAAAAATTTGTGCAGTTTCAGCTAACTGTAAATATTGTTGCTCTGGTTATCAACTTTGTTTCTGCATGCATCACTGGATCTGCGCCACTCACAGCTGTTCAGTTGCTTTGGGTAAATTTGATTATGGACACATTGGGTGCACTGGCTCTGGCTACTGAGCCTCCCAATGATGGACTAATGGAAAGACCCCCAGTTGGAAGAAAAGCAAGTTTTATCACCAAACCAATGTGGAGGAATATCTTTGGTCAGAGTTTGTATCAATTGATTGTCCTTGCACTTCTCACTTTTGATGGGAAGAGGCTACTGGGACTTACTGGTTCAGATGCAACTCAAGTGCTCAACACTTTGATCTTCAACTCCTTTGTATTTTGCCAGGTATTCAATGAGATAAACAGCAGAGAAATTGAAAAGATAAACATATTCAGAGGCATGTTCGACAGCAAGATATTCTTTGCTGTCATTTTCTCGACAGTGGCATTTCAAGCAATCATAGTCGAGTTCCTGGGAACCTTTGCGAGCACGGTACCTCTGAACTGGCAGCACTGGTTGCTCAGTGTATTAATTGGAGCAGTCAGCATGCCCATATCTGCTATTCTCAAGTGCATTCCAGTTGAAAGAGACACAACAACAAAGAACCATGATGGTTATGAAGCACTTCCATCTGGTCCGGAGCTTGCTTAA 3120 0.4173 MDNYLKEFELEPKDRSIEALSRWRSAVSAWVIKNRRRRFRNVVDLVKLTLAEEKKKKIQHKLRSIRVVVQVHRAKDLLKNAISSAVEYELSEKTRESGFRIEPDDIATLVSAHDLKNFKKIGRAEGIARKLSVSVNDGVSQDSIHNRQQIYGLNRYTERPSKSFLMFVWEALHDLTLIILIVCALVSIAIGLPTEGWPKGVYDGLGIILSVFLVVTVTAISDYQQSLQFRDLDKEKKKLFVQVTRDGKRQKVSIYDLVVGDIVHLSTGDQVPADGVFVTGYSLLIDESSLSGESEPVNIDEQKPFLLAGTKVQDGQGKMIVTTVGMRTEWGKLMETLSEGGEEETPLQVKLHGVATIIGKIGLAFAVLTFIVLTIRFLVEKAVSGDFSSWSMNDAMKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVNKIWVCEKEAEIKGNESAEKLKTEIPEEVMNILLQAIFQNTSSEVVKDETGNNTILGTPTESALLEFGLLTGGDFDAQRSTYKIIKVEPFNSVRKKMSVLVSLPNGGVRAFCKGASEIILRMCDKIIDSNGNAADLPEEQAKKVNDVINNFASEALRTLCLAVKDIDATEGESSIPDHGYTLIAIVGIKDPVRPGVREAVQTCLAAGITVRMVTGDNINTARAIAKECAILTEGGVAVEGPEFRNLSPEQMRDIIPNIQVMARSLPLDKHTLVSNLRNMFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVNVAKWGRAIYINIQKFVQFQLTVNIVALVINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMERPPVGRKASFITKPMWRNIFGQSLYQLIVLALLTFDGKRLLGLTGSDATQVLNTLIFNSFVFCQVFNEINSREIEKINIFRGMFDSKIFFAVIFSTVAFQAIIVEFLGTFASTVPLNWQHWLLSVLIGAVSMPISAILKCIPVERDTTTKNHDGYEALPSGPELA 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01596 1039 Gene3D - 15 77 - -
Arst3g01596 1039 PRINTS H+-transporting ATPase (proton pump) signature 613 631 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst3g01596 1039 PRINTS H+-transporting ATPase (proton pump) signature 756 772 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst3g01596 1039 PRINTS H+-transporting ATPase (proton pump) signature 788 813 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst3g01596 1039 SMART Cation_ATPase_N_a_2 117 192 IPR004014 -
Arst3g01596 1039 ProSitePatterns E1-E2 ATPases phosphorylation site. 457 463 IPR018303 -
Arst3g01596 1039 Gene3D - 138 338 - -
Arst3g01596 1039 FunFam Calcium-transporting ATPase 773 1019 - -
Arst3g01596 1039 PANTHER CATION TRANSPORTING ATPASE 90 1017 - -
Arst3g01596 1039 PANTHER CATION TRANSPORTING ATPASE 90 1017 - -
Arst3g01596 1039 Pfam E1-E2 ATPase 241 433 - -
Arst3g01596 1039 FunFam Calcium-transporting ATPase 653 801 - -
Arst3g01596 1039 FunFam Calcium-transporting ATPase 215 338 - -
Arst3g01596 1039 NCBIfam HAD-IC family P-type ATPase 723 844 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst3g01596 1039 NCBIfam HAD-IC family P-type ATPase 207 479 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst3g01596 1039 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 47 IPR024750 GO:0005516
Arst3g01596 1039 Pfam Cation transporter/ATPase, N-terminus 124 187 IPR004014 -
Arst3g01596 1039 PRINTS P-type cation-transporting ATPase superfamily signature 455 469 - -
Arst3g01596 1039 PRINTS P-type cation-transporting ATPase superfamily signature 286 300 - -
Arst3g01596 1039 PRINTS P-type cation-transporting ATPase superfamily signature 780 792 - -
Arst3g01596 1039 PRINTS P-type cation-transporting ATPase superfamily signature 653 664 - -
Arst3g01596 1039 PRINTS P-type cation-transporting ATPase superfamily signature 675 685 - -
Arst3g01596 1039 PRINTS P-type cation-transporting ATPase superfamily signature 756 775 - -
Arst3g01596 1039 Pfam Cation transport ATPase (P-type) 511 595 - -
Arst3g01596 1039 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 461 665 IPR023299 GO:0000166
Arst3g01596 1039 SUPERFAMILY Calcium ATPase, transduction domain A 240 336 IPR008250 -
Arst3g01596 1039 SFLD Haloacid Dehalogenase 437 809 - -
Arst3g01596 1039 SFLD Haloacid Dehalogenase 437 809 - -
Arst3g01596 1039 Gene3D - 465 660 IPR023299 GO:0000166
Arst3g01596 1039 SUPERFAMILY HAD-like 454 861 IPR036412 -
Arst3g01596 1039 SFLD p-type atpase 437 809 IPR044492 -
Arst3g01596 1039 SFLD p-type atpase 437 809 IPR044492 -
Arst3g01596 1039 FunFam Calcium-transporting ATPase 465 660 - -
Arst3g01596 1039 SUPERFAMILY Calcium ATPase, transmembrane domain M 123 1017 IPR023298 -
Arst3g01596 1039 Gene3D - 170 1015 - -
Arst3g01596 1039 Gene3D - 452 801 IPR023214 -
Arst3g01596 1039 CDD P-type_ATPase_Ca_PMCA-like 146 889 - -
Arst3g01596 1039 Pfam Cation transporting ATPase, C-terminus 841 1014 IPR006068 -
Arst3g01596 1039 NCBIfam calcium-translocating P-type ATPase, PMCA-type 114 1018 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Arst3g01596 1039 NCBIfam calcium-translocating P-type ATPase, PMCA-type 114 1018 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01596 Arst-Chr3 16986673 16999342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01596 65 1036 Primary Pumps ATPases AT3G57330 71.942 0.0 1460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01596 K01537 - gmx:100785768 1670.21