Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01540 ATGGTCTCAAAAATTAAGATGTCAAAAGGGTATTCTGTGATTGTACTCTTACTATTATTTTTATCTCTGATTCTTTGCACGGCCGAAGGGTTGAACGCAGAGGGGCAAATCCTCCTAGACCTCAAGAATGGTTTCCATGATAAGAATAATCTTTTGCGGAATTGGAACCCTGCTGATGAAACTCCATGTGAATGGTTAGGCGTAAATTGCTCTTATTATGAATATAATAATAGTAAAAGTCCAGTTGTCATGTCCCTTGATTTGAGTTCAATGGGTCTTTCTGGAATTTTAAATGGTAGTAGCATTGGAGGTTTGACTCACCTAACTTATCTCAATCTTTCTCACAATAAGTTGAGTGGAAAAATACCAAAGGAAATTGGCGATTGCTTGAATTTGGAGTATCTTTACTTGAACAATAACCAATTTCAGGGACCAATTCCTGATGAACTGGGGAATTTGTCTCGTTTGAGAAGCTTGAACATATGCAACAACAAACTCAATGGTGTTTTTTCAGATGAGTTTGGGAACTTGTCTTCATTGGTTGAATTGGTAGCCTATAGCAATTTTCTTGTTGGTCCCTTGCCTAGTACCATTGGGAAGCTCAAGAATCTTGTGACTTTCAGAGCCGGGGCAAATAACATTACCGGTTCACTGCCAAAGGAAATAAGTGGGTGCGCAAGCTTGATGTATCTCGGTCTTGCGCAAAATGATATATCAGGGGAGCTTCCAAGTGAGATTGGGATGCTTCAGAATTTAACAGAATTGATTCTATGGGACAATCAGTTATCAGGGCCTATTCCCAAAGAGATTGGGAATTTAACCAATCTTGAGATTCTTGCTTTGTATTGGAATGATCTTGTTGGACCTATACCTCCAGAGATTGGGAACCTCAAGTCATTGAAGTTTTTGTATCTATACAAAAACAATCTGAATGGAACCATTCCAAGGGAAATTGGGAACCTTTCTTCTGCTAGGGAAATTGATTTCTCAGAGAACTCTCTAGTAGGGTACATCCCATCCGAGCTGAGCAAAATCCGTGACCTGCGCTTGCTCTTTCTTTTCGAGAACCATTTAATTGGTGTCATACCGGATGAGCTCAGTAGCTTGAGGAATCTGTCAAGGCTCGACCTGTCCATGAATGGCCTTACTGGCTCGATTCCTTCAGGATTTCAATACTTGACTAATATGTCCCAGTTGCAGCTCTTTGACAACAAGTTGAGTGGTGTTATCCCTCAAGAACTTGGACTTCATAGTCCTCTTTGGGTGGTTGATTTCTCTGATAACAATTTGACAGGAACAATACCTCCTCATCTATGCTGGAATTCTCATTTGATGTTGTTGAACCTTCAATCCAACCGGTTTTATGGAAACATACCAAGAGGGATACTCAAGTGCAAGTCATTAGCGCAGATGCTTGTAGTTGGAAACATGCTTACAGGTGGCTTCCCTTCAGAACTCTGCAAACTGCCAAACTTCATCGCCATCGAGTTGAACGAAAACAAGTTCAGTGGTCCGATTCCTCCTGTGATCGCGAACTGCAGTAAATTACAAAGACTACACATAGCAAACAATTACTTCACACTGGAGTTACCTAAGGAAATTGGAAATCTTTCTCAGCTGGTGACCTTCAATGTTTCATCAAACCACTTCACTGGAACAATCCCATCCGAAATCTTTAGGTGCCAGAAGCTGCAAAGGCTGGATCTCAGTAACAACAAGTTTATTGGTTCCTTGCCGAACAACATAGGAACACTTGAACATTTGGAGATTCTCAAACTCTCTGGCAATGAACTCTCTGGAAAAATCCCTGAAGAAATAGGTAATCTATCTCATTTGAACTGGCTGCAAATGGATGGCAATTTGTTTTCCGGCGAAATTCCGGCTCAGCTTGGTCGCCTCTCGACCTTGCAGATTGGAATGGATCTCAGTTACAATAATCTTTCTGGGAGAATACCATCTCAGCTCGGTAATCTCAATATGCTTGAGTATATCTATCTCAATAACAATCATTTGGATGGCGAAATTCCAAGCTCATTCGACCAGCTTTCGAGCTTGCTGGGATGCAATTTCTCATACAACAACCTCTCTGGACCAATACCTTCAGATAAGATCTTCCAAAATATGGCTGCAAGCAGTTTTCTTGGTGGTAACAACGACCTCTGCGGTAGACCTCTCAATGAATGCAACTCCGATCTGTCTTCTCGTGGTTTTCCTCCGGTTAGACATGACTATTCTCGCCGTGCTAAAATAGTCATGATCGCTGCAGCCACCGTGGGCAGCGTTTCTCTCATCTTAATTTTAGTTATTTTATATGTTATGAGATGGCCGTTCAATTCCGCGAGTTCCTTGAGAGACACGGAATCTCCCTGCCTTGATTCGGATGTCTATTTTCCTCCGAAGGACGGCTTCACATTCCAGGATCTTGTTGAGGCAACGAAAAGGTTTCATGAGAGCTATGTGATTGGCAGGGGAGCCTGTGGGACGGTTTACAAAGCGGTGATGAAGTCCGGGAAGACGATTGCAGTTAAGAAGTTAGCATCAAACAGGGAAGGGAACAACATTGAGAATAGTTTTAGAGCTGAGATACTGACACTAGGGAAGATTCGGCATAGAAACATTGTGAAGCTTTATGGATTCTGCTATCACCAAGGCTCCAATCTGCTGCTTTATGAGTACATGGAGAGGGGAAGCTTAGGTGAAGTGTTGCATGGTTCTGCTACCAATTTGGAGTGGCCAATTCGGTTCATGATTGCTCTTGGTGCTGCTGAGGGTCTTGCCTACTTGCACCATGATTGCAAGCCAAAGATTATTCACCGGGATATAAAATCTAATAACATTCTTCTTGATGAAAATTTTGAGGCTCATGTTGGTGACTTTGGGTTAGCCAAAGTGATTGACATGCCACAATCAAAATCCATGTCTGCAGTTGCTGGATCTTATGGCTATATTGCTCCTGAATATGCATACACCATGAAGGTAACAGAAAAGTGTGACATTTATAGCTATGGCGTTGTGCTCTTGGAACTGCTAACAGGTAGAGCACCTGTTCAACCATTGGAGCAAGGTGGTGATCTTGTGACATGGGTTAGAACCCATATTCGGAGCCACAACAACGTGTTGACGCAGGGAATACTCGACAATCGCATTGATCTTGAAGAACAAATCACTGTGAATCACATGCTGACTGTTCTGAAGATTGCTCTGCTTTGCACAAGCATGTCTCCTTCAGAGAGGCCTTCGATGCGCGAAGTCGTGTTGATGCTTATCGAGTCGAATGAACGCGAAGGAAACTTAACGCTCACTCGGACTAACCATGATCTTCCTTCCAAAGATGCCACACATTAG 3345 0.4251 MVSKIKMSKGYSVIVLLLLFLSLILCTAEGLNAEGQILLDLKNGFHDKNNLLRNWNPADETPCEWLGVNCSYYEYNNSKSPVVMSLDLSSMGLSGILNGSSIGGLTHLTYLNLSHNKLSGKIPKEIGDCLNLEYLYLNNNQFQGPIPDELGNLSRLRSLNICNNKLNGVFSDEFGNLSSLVELVAYSNFLVGPLPSTIGKLKNLVTFRAGANNITGSLPKEISGCASLMYLGLAQNDISGELPSEIGMLQNLTELILWDNQLSGPIPKEIGNLTNLEILALYWNDLVGPIPPEIGNLKSLKFLYLYKNNLNGTIPREIGNLSSAREIDFSENSLVGYIPSELSKIRDLRLLFLFENHLIGVIPDELSSLRNLSRLDLSMNGLTGSIPSGFQYLTNMSQLQLFDNKLSGVIPQELGLHSPLWVVDFSDNNLTGTIPPHLCWNSHLMLLNLQSNRFYGNIPRGILKCKSLAQMLVVGNMLTGGFPSELCKLPNFIAIELNENKFSGPIPPVIANCSKLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNHFTGTIPSEIFRCQKLQRLDLSNNKFIGSLPNNIGTLEHLEILKLSGNELSGKIPEEIGNLSHLNWLQMDGNLFSGEIPAQLGRLSTLQIGMDLSYNNLSGRIPSQLGNLNMLEYIYLNNNHLDGEIPSSFDQLSSLLGCNFSYNNLSGPIPSDKIFQNMAASSFLGGNNDLCGRPLNECNSDLSSRGFPPVRHDYSRRAKIVMIAAATVGSVSLILILVILYVMRWPFNSASSLRDTESPCLDSDVYFPPKDGFTFQDLVEATKRFHESYVIGRGACGTVYKAVMKSGKTIAVKKLASNREGNNIENSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLLYEYMERGSLGEVLHGSATNLEWPIRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLEQGGDLVTWVRTHIRSHNNVLTQGILDNRIDLEEQITVNHMLTVLKIALLCTSMSPSERPSMREVVLMLIESNEREGNLTLTRTNHDLPSKDATH 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01540 1114 Gene3D Phosphorylase Kinase; domain 1 781 892 - -
Arst3g01540 1114 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Arst3g01540 1114 ProSiteProfiles Leucine-rich repeat profile. 563 585 IPR001611 GO:0005515
Arst3g01540 1114 Gene3D Transferase(Phosphotransferase) domain 1 893 1107 - -
Arst3g01540 1114 Pfam Protein kinase domain 816 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01540 1114 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 195 286 - -
Arst3g01540 1114 Gene3D Ribonuclease Inhibitor 414 732 IPR032675 -
Arst3g01540 1114 SMART LRR_typ_2 249 273 IPR003591 -
Arst3g01540 1114 SMART LRR_typ_2 369 392 IPR003591 -
Arst3g01540 1114 SMART LRR_typ_2 393 417 IPR003591 -
Arst3g01540 1114 SMART LRR_typ_2 105 129 IPR003591 -
Arst3g01540 1114 SMART LRR_typ_2 537 561 IPR003591 -
Arst3g01540 1114 SMART LRR_typ_2 585 609 IPR003591 -
Arst3g01540 1114 SMART LRR_typ_2 297 321 IPR003591 -
Arst3g01540 1114 SMART LRR_typ_2 153 176 IPR003591 -
Arst3g01540 1114 SMART LRR_typ_2 658 681 IPR003591 -
Arst3g01540 1114 SUPERFAMILY L domain-like 475 725 - -
Arst3g01540 1114 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 585 1083 - -
Arst3g01540 1114 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 779 892 - -
Arst3g01540 1114 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 585 1083 - -
Arst3g01540 1114 SUPERFAMILY Protein kinase-like (PK-like) 793 1088 IPR011009 -
Arst3g01540 1114 ProSiteProfiles Protein kinase domain profile. 815 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01540 1114 SUPERFAMILY L domain-like 79 473 - -
Arst3g01540 1114 Gene3D Ribonuclease Inhibitor 289 395 IPR032675 -
Arst3g01540 1114 Pfam Leucine rich repeat 83 142 IPR001611 GO:0005515
Arst3g01540 1114 Pfam Leucine rich repeat 563 621 IPR001611 GO:0005515
Arst3g01540 1114 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 30 194 - -
Arst3g01540 1114 ProSitePatterns Serine/Threonine protein kinases active-site signature. 936 948 IPR008271 GO:0004672|GO:0006468
Arst3g01540 1114 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 289 393 - -
Arst3g01540 1114 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 893 1105 - -
Arst3g01540 1114 Gene3D Ribonuclease Inhibitor 188 288 IPR032675 -
Arst3g01540 1114 Gene3D Ribonuclease Inhibitor 188 288 IPR032675 -
Arst3g01540 1114 Gene3D Ribonuclease Inhibitor 30 187 IPR032675 -
Arst3g01540 1114 Pfam Leucine Rich Repeat 661 682 IPR001611 GO:0005515
Arst3g01540 1114 SMART serkin_6 815 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01540 1114 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 417 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01540 Arst-Chr3 14551035 14556823 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01540 31 1090 Receptor kinase-like Gene Family AT4G26540 38.091 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst3g01540 Pkinase 3.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01540 - - gmx:100805792 1668.67