Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01534 ATGGAAAGTGATGGTATGGAGCATCTCGTTGATGACAAAAGTGATGGTATGGAGCATCTTGTTGATGATGACAAAGGTGATGGTGTGGAGCATGTTGTTCATGATAAAAGTGATACTATGGAGCATGCGGATGATGATGATAGTGATGATTCTAGTAGTGACAGCGGTGATGATGATTTACAAGAGGATCAAGGTAAAGGAAATGATGTAAGTCACATGGAAGAGGCTACCATGTTTAAGAATAAAGCCGAACTGAGTAAAGAGGAAGTTTTGAAAATGGTGTTCGATACTCATGAAAAGGCCTATGATTTTTATGTGAGTTATGCTAAGTGTGTTGGATTTAGTGTCCGGAAAGGAGATGTGGCTCGTGATGATGATGGCAAGTTGATAAGACGAAGATTTGTATGCAACAGGCAAGGCTTGAGAGACAAAAAACATTACATGAGAATTGATAGAAAAAGGGATCAGAAACCGGAGACTAGGACGAATTGTCATGCAATGTTGAGTATTTACCTTGACAACCACACTTCAACTTGGAGAGTGAGAACCTTTGAAAAAGGCCACAACCATGAGCTAGCACCTGCTGGATTTGATTACATCGTGCCAAATACTCGTCGGTTAACAACGGCAAAAAAGGCACAAAGTGATGGTATCCGCATACATGGATTCCTAACATTTCAAATAATGGGTTTTATGGTTGGTCAAGCTAGGGCTTTTGCTGGAGTTGAATTCTCAAAGGACTTGTACAGTTACATTGATAAACAAAGATGTCCTAAGATAGTTGATGGTGATGCACTTGCAGCTATTAGCTACTTGCAGGGTAAGGCAGATTCTGATCCAACTTTGTTTGCTAGGTACACCACTACAGATGATGATCAATTGGGAAATTTGTTTTGGGCTGATGGCTTAAGTCAAGTTGACTATGAGTACTTTGGGGATGTGGTTGGACTTGATACAAAATACAAAGAAAGCATGTACCACAGACGCTTAGTTATCTTTTCTGGTACTAATCATCATCGACAAACTTGTATTTTTGCATGTGCCTTACTAGGTGATGAGCGAGCTGACACATATAAATGGGCATTGGAGAATTTCTTAGATGCAATGGAAAAGAAGCACCCAAGTGCAGTGGTAACTGATGATAATGAGGCCATGAGAGAGGCAATTCAGGTGGTGTTCCCAAATGCTACCCATAGGTTATGTGCTTGGCATCTTCAAAAAGGTGCAGCGTACAACATTAGGGATACTGAATTTGTTGAGGCTTTCAAGAAATCTATTTATACCAACTTTGATCCTGATGAGTTTGAGGAGTATTGGCGTAACATGATACAAAAGTTTGAGGTATACGATAGTATGTGGGTAGAGGAGACATATAAGAAGAAGGAAATGTGGGCCACTACTTACCTTCGTGATAAGTTCTGTTCTGGACTAAGAGCATCATCACGATGTGAGGGTTTAAACCCATTGATGAAGAAATATATCAAGGCAAGGCACAATATACTCGAATTGGTACAACACTTTGAGCTTGCATTGAAGGAATTTAGGAACAATGAATTGGTAGCAGAGTTCAATTCCATGTACAATGAGCCTGTTTTGACAACTGCATTAGAATCAATTGAGCGCAAGGCTGCTAAAGTGTTTACGAGGGAAATTTTCAAAGAAGTGCAAAAAGAGTTAGAAGGGGCTGCTTTACTATTTGTTGTTGGATGTGAAAACCTTTCAACGACTGCCACGTTTAAATTGAGTAAGTATGGCAAGCCTGGTTGGGAATACAAGGTGACATATGACAGAGAATCACAGAAATTTGAATGCCAGTGTTGCCTTTGGAGTACCCATGGCATTCCCTGTAGTCACATATTTTGTGTTATGATTTATGAACATATTGCAGAATTACCCGAAAAGATGATTCTTAAAAGATGGACTCAAGCTGCAAAGTCTTTTAATGAGCTTCCGGATGAAGAAGATGAGGTGAATGATAAAAAGTTCTTGTTTCGTTATGGTGCATTATGTGCTGCAAGTAATTGGATGTCATTTCTGGCAGCAAGAAAATTGCATAATTTTCTTGAAACAAAAGATGAAATTTATAAAATCACGGCTAAGCTAGAGCATAAAGGCTGTATGGTGGATACCAGATCATTTTCTATTCCCAAGAATACCATGGATGACACGACCAAGGGTGCATCACTAACTTATAAGAATGGTAAGAAGCGGAGGCGTTGCAAAGCTTGTAACAAGATGGGTCATTCAAAGTCTAGTTGTCCAAGGGTCAAGGACAGAAGGTCTCGAGGAGATGATCTCAGTTCGTCTTCAATGTCAGATAATCCTCGAAATGCGGGTCATGCCACAAATAGCGCAGTGGATCCTCCAAATACTGGTCCTGCAACACATAACACTCTGGATGATCCTCCAAATGCAGGTCCTGCAACAAATAACGAGGTAGGGCAGCCTCCAACAGACTCATCGACCGCCATGACACAATCGCTAGCTGTGAATCATGCAGCTGCAGCCTCTCGATTCGGGGTATGGGGACCCCAATTTCTTCTTCCTGGTCCTGGTCAACCTTGTTTTGCCGCAAATATAGGTCACCAATACTATCTTGCAAATCAAGGTGCTAGATATTATCCCCTTGCTCCAGCCCAACAGCAATTTCTTAGACCTCAAGGTTTAGTGCAGCGGTTTGTTCCTCAAGGTGTATTACCCCAGCAATATGTCGGAGGTCCGAATCCTCAATTCCAAGGCTTAGCACAGCAAAAGCGTGGCAAAGGTCGTGCTCGTCGATGA 2781 0.4132 MESDGMEHLVDDKSDGMEHLVDDDKGDGVEHVVHDKSDTMEHADDDDSDDSSSDSGDDDLQEDQGKGNDVSHMEEATMFKNKAELSKEEVLKMVFDTHEKAYDFYVSYAKCVGFSVRKGDVARDDDGKLIRRRFVCNRQGLRDKKHYMRIDRKRDQKPETRTNCHAMLSIYLDNHTSTWRVRTFEKGHNHELAPAGFDYIVPNTRRLTTAKKAQSDGIRIHGFLTFQIMGFMVGQARAFAGVEFSKDLYSYIDKQRCPKIVDGDALAAISYLQGKADSDPTLFARYTTTDDDQLGNLFWADGLSQVDYEYFGDVVGLDTKYKESMYHRRLVIFSGTNHHRQTCIFACALLGDERADTYKWALENFLDAMEKKHPSAVVTDDNEAMREAIQVVFPNATHRLCAWHLQKGAAYNIRDTEFVEAFKKSIYTNFDPDEFEEYWRNMIQKFEVYDSMWVEETYKKKEMWATTYLRDKFCSGLRASSRCEGLNPLMKKYIKARHNILELVQHFELALKEFRNNELVAEFNSMYNEPVLTTALESIERKAAKVFTREIFKEVQKELEGAALLFVVGCENLSTTATFKLSKYGKPGWEYKVTYDRESQKFECQCCLWSTHGIPCSHIFCVMIYEHIAELPEKMILKRWTQAAKSFNELPDEEDEVNDKKFLFRYGALCAASNWMSFLAARKLHNFLETKDEIYKITAKLEHKGCMVDTRSFSIPKNTMDDTTKGASLTYKNGKKRRRCKACNKMGHSKSSCPRVKDRRSRGDDLSSSSMSDNPRNAGHATNSAVDPPNTGPATHNTLDDPPNAGPATNNEVGQPPTDSSTAMTQSLAVNHAAAASRFGVWGPQFLLPGPGQPCFAANIGHQYYLANQGARYYPLAPAQQQFLRPQGLVQRFVPQGVLPQQYVGGPNPQFQGLAQQKRGKGRARR 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01534 926 SUPERFAMILY Retrovirus zinc finger-like domains 722 760 IPR036875 GO:0003676|GO:0008270
Arst3g01534 926 MobiDBLite consensus disorder prediction 767 824 - -
Arst3g01534 926 MobiDBLite consensus disorder prediction 751 766 - -
Arst3g01534 926 MobiDBLite consensus disorder prediction 740 824 - -
Arst3g01534 926 Pfam FAR1 DNA-binding domain 103 193 IPR004330 -
Arst3g01534 926 MobiDBLite consensus disorder prediction 1 71 - -
Arst3g01534 926 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 84 660 IPR031052 GO:0006355
Arst3g01534 926 MobiDBLite consensus disorder prediction 42 58 - -
Arst3g01534 926 MobiDBLite consensus disorder prediction 905 926 - -
Arst3g01534 926 MobiDBLite consensus disorder prediction 1 41 - -
Arst3g01534 926 ProSiteProfiles Zinc finger SWIM-type profile. 591 627 IPR007527 GO:0008270
Arst3g01534 926 Pfam MULE transposase domain 314 407 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01534 Arst-Chr3 14335906 14341761 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst3g01534 MULE 2.5e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01534 - - adu:107477751 1861.66