Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01521 ATGTGGGCTCCGTTTTTTTTATTGGGTCATCAGGGGTGGGCTCGTTTATATGGACTAATATATCTACTCAACCCACTTAGAAGTTGCCACTGCCACTTTCTTCATCTCCAGGCTCCAGCACCGTCTCTACTTTGCGCTGCACCGCTGCTGTTGTTGTTTCTGCCTTGCACTGCCAGATTCGCCACTGATGTAATCCCTCTTGTCTACTCGCCATCGTCGTGTTCGTCATTGCTGGAGCTCGCGTCTTGTTCGGCATGGACCTTCGACGAGGCTTCCATGGATCACAGTAAGGAACTACTCGAATTAGGTGAAGCTGTTGGAACCCAAAGCCGTGGTCTTACCCAAGAGCAAATTTCGATGCTTCCAGTTTCATCAAAGTACAAGTGTGGGTTCTTCTCAAGGAAGAAGTCGAGGGATGAGAGGCTTGTCCTATATGTTACAGAGAAGTGTTTTAGCCAACAGAAATAA 468 0.4786 MWAPFFLLGHQGWARLYGLIYLLNPLRSCHCHFLHLQAPAPSLLCAAPLLLLFLPCTARFATDVIPLVYSPSSCSSLLELASCSAWTFDEASMDHSKELLELGEAVGTQSRGLTQEQISMLPVSSKYKCGFFSRKKSRDERLVLYVTEKCFSQQK 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01521 155 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 89 144 IPR033276 GO:0004842|GO:0016567|GO:0046621
Arst3g01521 155 ProSitePatterns Integrins alpha chain signature. 127 134 IPR018184 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01521 Arst-Chr3 13993269 13995586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01521 97 144 C3H Transcription Factor Family AT3G63530 61.224 5.81e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01521 K19045 - adu:127745664 245.743