Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01515 ATGTTCCAACCAAACATGACTGAAGCTGTTGGTGGCCTTCACTATCATCACCAGTATCATCCTTTTGATATGGCTCAGAACACAACAACATCGGAGAGTGATGTACCGAGAATTCGAGAGGACGAGTTATTCGACAGCGCCACCAAGTCCGGCAGCGAGAACCTTGAGGTTGAAGGTGGTGGAGGAAGTGGTGGTGGTGGTGAAGGTGGTTCTGCTGGGGAAGACCAAAACCCTCGCCCTAATAAGAAGAAACGCTATCACCGCCATACCCAACACCAGATCCAAGAGATGGAAGCTTTCTTTAAGGAGTGCCCTCACCCAGATGACAAGCAAAGGAAGGAGCTGAGTAGGGAGTTAGGGTTAGAGCCATTGCAAGTGAAGTTCTGGTTCCAGAACAAACGCACTCAAGTGAAGACTCAAACTGAAAGGAGCGAGAACTCACAGCTAAGAGCGGAAAATGAGAAGCTTAGAGCAGATAACATGAGGTATAGGGAAGCACTAAGCAATGCATCGTGCCCTAGTTGTGGTGGCCCAACCGCCATAGGGGAAATGTCATTCGATGAACATCACCTCAGGCTTGAAAATGCACGTCTTAGGGAAGAGATTGATCGAATTTCAGCAATTGCAGCCAAGTACGTAGGCAAGCCTGTGGTGAACTATTCAAACCTCTCCCCTGCCCTCCCACCTCGCCCGCTAGAACTCGGCGTTAGCGGTGGCAGTGGCGGCTTTGGAGGTGGTAGTGACATGTACAGTGGTGGTGCCGGAGACTTCCTGAGGTCGATAAACGGGCCCTCGGAAGCCGACAAGCCACTGATAATTGAGCTGGCTGTTGCAGCCATGGAGGAGTTAGTTGGGATGGCACAAATGGGTGAGCCACTTTGGTTGACAATGACCTCCATTGACGGTGGCACTTCCACTGTGCTCAACGAGGATGAGTACGTTAGAACCTTCCCTCGTGGAATTGGCCCCAAACCTGCTGGGTTCAGATCCGAAGCTTCTAGAGAAACCGCTGTTGTTATCATGAACCATGTTAACCTCGTCGAAATTCTCATGGATGTGAACAATTGGTCGACAATGTTCTCTGGTATAGTCTCAAGAGCTATAACTATAGAAGTGCTATCAACAGGAGTGGCTGGGAACTACAATGGTGCTTTACAAGTGATGAGTGCAGAATTACAAGTACCTTCTCCACTTGTGCCAACTCGAGAGAGCTATTTTGTGAGATATTGTAAGCAGCATGTAGATGGGAGTTGGGCAGTGGTGGATGTGTCGTTGGATCATTTGCGCCCTGGTCTTACTCCAAGATCTAGAAGAAGGCCTTCTGGTTGCTTAATCCATGAAATGCCCAATGGTTATTCTAAGGTGACATGGGTTGAGCATGTGGAAGTGGATGATAGAGGTGTTCCTAACCTTTACAAGCAGCTTGTAAACTCTGGGCATGCATTTGGTGCAAAACGTTGGGTTGCAACTTTGGATAGACAATGTGAGAGGCTTGCTAGTGCCATGGCAACAAACGTTCCTACCGTAGATGTTGGAGTGATAACAAACCAAGAAGGGAGGAAGAGTATGCTGAAGCTGGCAGAGAGAATGGTGATAAGCTTTTGTGGAAGACCACCTGGCATTGTTCTAAGTGCTGCCACTTCCTTTTGGCTTCCAGTTCCTCCCAAAACAGCCTTTGATTTCCTCCGTGATGAGAATTCAAGAAGTGAGTGGGATATTCTTTCAAATGGTGGAGCAGTGCAAGAAATGGCGCACATTGCAAATGGAAGAGATACCGGAAATTGTGTGTCGCTACTTAGAGTCAATAGTGCAAATTCAAGCCAGAGCAACATGTTGATACTGCAAGAGAGCTGCACAGATTCAACAGGCTCCTTTGTAGTTTATGCTCCTGTGGACATTGTTGCCATGAATGTGGTTTTGAATGGAGGGGACCCAGATTATGTGGCACTTCTTCCTTCAGGATTTGCCATCCTCCCCGATGGAAGTTCAGGCGGCTGCGGCAGCGGCATTGGTGGTGAAACAAATGGCCCTACTGGTGGGGGCGGTGGCGGCGGAGGTGGTTCTCTATTGACGGTTGCATTCCAAATATTGGTTGATTCAGTTCCAACGGCTAAGCTTTCTCTTGGGTCAGTTGCAACCGTTAATAGTCTTATTTCTTGCACTGTTGAGAGAATCAAGGCTTCTTTGTCTGGTGATCCTGCTTCACTATGA 2211 0.4826 MFQPNMTEAVGGLHYHHQYHPFDMAQNTTTSESDVPRIREDELFDSATKSGSENLEVEGGGGSGGGGEGGSAGEDQNPRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQVKTQTERSENSQLRAENEKLRADNMRYREALSNASCPSCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYSNLSPALPPRPLELGVSGGSGGFGGGSDMYSGGAGDFLRSINGPSEADKPLIIELAVAAMEELVGMAQMGEPLWLTMTSIDGGTSTVLNEDEYVRTFPRGIGPKPAGFRSEASRETAVVIMNHVNLVEILMDVNNWSTMFSGIVSRAITIEVLSTGVAGNYNGALQVMSAELQVPSPLVPTRESYFVRYCKQHVDGSWAVVDVSLDHLRPGLTPRSRRRPSGCLIHEMPNGYSKVTWVEHVEVDDRGVPNLYKQLVNSGHAFGAKRWVATLDRQCERLASAMATNVPTVDVGVITNQEGRKSMLKLAERMVISFCXGRPPGIVLSAATSFWLPVPPKTAFDFLRDENSRSEWDILSNGGAVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGSSGGCGSGIGGETNGPTGGGGGGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLISCTVERIKASLSGDPASL 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01515 737 MobiDBLite consensus disorder prediction 24 96 - -
Arst3g01515 737 CDD START_ArGLABRA2_like 269 496 - -
Arst3g01515 737 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 81 537 IPR042160 -
Arst3g01515 737 SUPERFAMILY Bet v1-like 267 499 - -
Arst3g01515 737 Gene3D - 327 497 IPR023393 -
Arst3g01515 737 Coils Coil 139 166 - -
Arst3g01515 737 ProSiteProfiles START domain profile. 265 500 IPR002913 GO:0008289
Arst3g01515 737 SMART HOX_1 81 144 IPR001356 GO:0003677
Arst3g01515 737 Pfam Homeodomain 83 138 IPR001356 GO:0003677
Arst3g01515 737 FunFam Homeobox-leucine zipper protein HDG1 70 156 - -
Arst3g01515 737 Pfam START domain 275 497 IPR002913 GO:0008289
Arst3g01515 737 Gene3D - 71 157 - -
Arst3g01515 737 FunFam Homeobox-leucine zipper protein GLABRA 2 274 496 - -
Arst3g01515 737 CDD homeodomain 83 140 IPR001356 GO:0003677
Arst3g01515 737 ProSitePatterns 'Homeobox' domain signature. 115 138 IPR017970 GO:0000981|GO:0006355
Arst3g01515 737 ProSiteProfiles 'Homeobox' domain profile. 80 140 IPR001356 GO:0003677
Arst3g01515 737 SUPERFAMILY Bet v1-like 517 727 - -
Arst3g01515 737 SMART START_1 274 497 IPR002913 GO:0008289
Arst3g01515 737 SUPERFAMILY Homeodomain-like 70 140 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01515 Arst-Chr3 13851541 13860025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01515 1 735 Homeobox Transcription Factor Family AT1G05230 69.271 0.0 1040
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst3g01515 START 1.7e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01515 K09338 - gmx:100782260 1134.01