Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01507 ATGGAGAATGATGTCGTCGCCACAATTGGACCACAGTCTTCTTCAATAGCTCATGTCGTCTCCCATGTGGCTAATGAACTTCATGTACCTCTTCTATCATTTGCTGCAACTGATCCTACTCTATCTGCACTTCAGTATCCATATTTCGTCCGAACCACTCACAGTGACTACTATCAGATGTATGCAATCGCTGACTTTGTCGAATATTTCAGATGGAGGGAGGTAATTGCCATTTTTGTAGATGATGATAATGGAAAGAATGGAATTTCTGTGTTGGGTGATGCATTGTCAACGAAGCGTGCCAAGATCTCTTATAAGGCTGCACTCCCTCTTGGGGCCAACAGAAGTGATGTCAGTGACTTGTTGAGTGAAGTGAACTTAATGGAATCAAGAATCTATGTTCTACATGTTAATCCTGGTTCTGGTTTGTCAATCTTTCGTGTTGCGAAGCAGCTAGGAATGATGAGCAATGGCTATGTTTGGATTGCAACAGATTGGCTTCCTCCGGTTCTGGATTCATCCGAGACACCAGACAGTGACACAATGAATGTTCTAGAAGGTGTTGTGGCTTTTCGCAATCACATTCCTGATACTGATATGAAGAAGAGTTTGATCACTAAATTGAAACGTCGAAAGGACAAGCAGACTTCAAGCTTCAATTCCTATGCATTCTATGCATATGATTCTGTCTGGTTAGCAGCTTATGCCCTTGACATTTTTCTCAATGAAGGTGGGAATATATCTTTCTCCAGTGACCCTAGATTGCATGACAATAATGGAAGCACCTTGCATTTAGAATCACTTCGCACTTTTGATAGTGGCCCTCAGTATCTGCAAACTATTTTAAGAACAAACTTCACTGGTTCGAGTGGTCGAATTGGGTTTGATACAGATAGGAATTTAATCCGTCCGGCATATGATATTCTGAATATTGTCGGATCTGGATTGCGTAGAATTGGTTACTGGTCTAATCACTCTAGTTTGTCAGTTGTAGCTCCTGATATTTCATATGCAAAATCATCCAACCATTCTTCTAAAAGCACTCAACAGCTTTATAGTGTGATATGGCCGGGAGATGCTAAAACTACACCAAAAGGATGGGTATTCCCCAACAATGGAAAGCCATTGCGGATAGCAGTGCCGAATCGAGTAAGCTACAAGGAGCTCGTTGCCAAAGACAAGAGTCCTACAGGAGTACAAGGCTATTGCATTGATGTCTTTGAAGCGGCGTTGAACTTGTTGGCTTATCCCGTCCCACGACAATATATATTGTATGGAAATGGTGAAAGGAATCCTAGCTACAATGATCTTGTAGATCAAGTTGCACAAAATAACTTTGATGCAGCTGTTGGAGATGTCACAATTGTCATGAACAGAACAAGGTTTGTGGATTTTACTCAGCCTTTTATGGAATCAGGGCTTGTTGTTGTTGTTCCTGTCAAGGAGGAGAAGTCAAGCCCCTGGTCTTTCCTTAAGCCATTCACAGCTCAAATGTGGTGTGTTACTGGTGCTTTCTTTCTTTTCGTGGGAACTGTTGTGTGGATCCTCGAGCACCGGCTCAATCACGAGTTCCGCGGTCCACCAAGGAAGCAACTAATAACAGTCTTTTGGTTTAGTTTGTCAACAATGTTCTTCTCACACAGAGAGAACACTGTGAGTGCTCTCGGGAGACTGGTGCTAATCATATGGCTATTTGTGGTGTTGATTATCAATTCAAGCTACACAGCTAGCTTGACATCAATCCTAACCGTGCAGCAGTTATCGACACAAATCGAAGGAATTGATAGCTTGATCTCTAGTAGTCAACCAATCGGAATTCAAGACGGGTCATTTGTGAAGAAGTATCTGACAGATGAACTCCACATAGCAGAATCTAGGATAGTTACATTGAAAAACATGGAGGCTTATATCGATGCTCTTCAGCGTGGGCCGAGCAATGGAGGGGTTGTGGCGGTTGTTGATGAACTTCCTTATATTGAGATCTTGATGGCCAATACTGAGTGCAAGTTTACAACTGTTGGCCAGGAGTTCACTAAAAGTGGCTGGGGATTTGCATTCCAGAGGGACTCTCCCCTCGCCGTTGACATGTCAACGGCGATTCTTGAACTCTCGGAGAATGGGGACCTGCAAAGGATCCATGACAAATGGCTTAATAAGAAGGAGTGTGCAAGCAATGATGCTGATTCAAACAAACTATCTTTGAAAAGCTTCTGGGGCCTCTTCCTTGTGTGTGGCATTACTTGTTTCCTTGCACTGATTGTATTCTTTGTTAGAGTGTTCTGTCAATACACAAAGTTCATCCCAGAGCACGAAGAAGCCGACGAGGAGATTCAACAACCGGTCCGGCGGCGTAGAAGGGCAACCAAAACTCCTAGCTTCAAGGAATTGATTGTTTTTGTAGATAAAAGAGAAGCAGAAATTAAAGAGATACTGAGACAGAAGAGTAGAAAGAGGCAGCGCAGCAAAAGTTTAGATGATAACTCAAATTCACCAGTCTAA 2499 0.4274 MENDVVATIGPQSSSIAHVVSHVANELHVPLLSFAATDPTLSALQYPYFVRTTHSDYYQMYAIADFVEYFRWREVIAIFVDDDNGKNGISVLGDALSTKRAKISYKAALPLGANRSDVSDLLSEVNLMESRIYVLHVNPGSGLSIFRVAKQLGMMSNGYVWIATDWLPPVLDSSETPDSDTMNVLEGVVAFRNHIPDTDMKKSLITKLKRRKDKQTSSFNSYAFYAYDSVWLAAYALDIFLNEGGNISFSSDPRLHDNNGSTLHLESLRTFDSGPQYLQTILRTNFTGSSGRIGFDTDRNLIRPAYDILNIVGSGLRRIGYWSNHSSLSVVAPDISYAKSSNHSSKSTQQLYSVIWPGDAKTTPKGWVFPNNGKPLRIAVPNRVSYKELVAKDKSPTGVQGYCIDVFEAALNLLAYPVPRQYILYGNGERNPSYNDLVDQVAQNNFDAAVGDVTIVMNRTRFVDFTQPFMESGLVVVVPVKEEKSSPWSFLKPFTAQMWCVTGAFFLFVGTVVWILEHRLNHEFRGPPRKQLITVFWFSLSTMFFSHRENTVSALGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSTQIEGIDSLISSSQPIGIQDGSFVKKYLTDELHIAESRIVTLKNMEAYIDALQRGPSNGGVVAVVDELPYIEILMANTECKFTTVGQEFTKSGWGFAFQRDSPLAVDMSTAILELSENGDLQRIHDKWLNKKECASNDADSNKLSLKSFWGLFLVCGITCFLALIVFFVRVFCQYTKFIPEHEEADEEIQQPVRRRRRATKTPSFKELIVFVDKREAEIKEILRQKSRKRQRSKSLDDNSNSPV 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01507 832 FunFam Glutamate receptor 613 721 - -
Arst3g01507 832 FunFam Glutamate receptor 371 487 - -
Arst3g01507 832 Gene3D - 369 486 - -
Arst3g01507 832 PRINTS Metabotropic glutamate GPCR signature 40 59 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst3g01507 832 PRINTS Metabotropic glutamate GPCR signature 8 34 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst3g01507 832 PRINTS Metabotropic glutamate GPCR signature 75 92 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst3g01507 832 PRINTS Metabotropic glutamate GPCR signature 59 75 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst3g01507 832 SMART GluR_14 377 719 IPR001320 GO:0015276|GO:0016020
Arst3g01507 832 Coils Coil 800 820 - -
Arst3g01507 832 Pfam Receptor family ligand binding region 2 313 IPR001828 -
Arst3g01507 832 SUPERFAMILY Periplasmic binding protein-like II 351 719 - -
Arst3g01507 832 SUPERFAMILY Periplasmic binding protein-like I 2 368 IPR028082 -
Arst3g01507 832 FunFam Glutamate receptor 487 617 - -
Arst3g01507 832 Pfam Ligand-gated ion channel 719 747 IPR001320 GO:0015276|GO:0016020
Arst3g01507 832 Gene3D - 55 327 - -
Arst3g01507 832 CDD GluR_Plant 374 717 - -
Arst3g01507 832 Pfam Bacterial extracellular solute-binding proteins, family 3 431 718 IPR001638 -
Arst3g01507 832 Gene3D - 609 722 - -
Arst3g01507 832 FunFam Glutamate receptor 55 222 - -
Arst3g01507 832 Gene3D - 1 303 - -
Arst3g01507 832 Gene3D - 487 608 - -
Arst3g01507 832 PIRSF IGluLR_plant 1 831 IPR017103 -
Arst3g01507 832 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 7 782 IPR015683 -
Arst3g01507 832 PIRSF IGluLR_plant 1 831 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01507 Arst-Chr3 13810585 13814586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01507 1 684 Ion Channels AT1G05200 66.374 0.0 981
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01507 K05387 - gmx:100802782 1286.55