Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01504 ATGGTTATTGGAACAAGGTGGTTTTTGTTTATGCTTGCTTTGTGTTTGTGGATTTTCCGCAATGAAGGAGTGGGAATAACAGGACCTTCACCTAATACCACTGTGAATTCCACTGTTTCTTCTTCAAGACCAAAGGTTGTGAAGATTGGAGTCTTGTTTACTTTGGATTCCATCATTGGAAGATCTGCTAAACCTGCTGTTATGGCTGCCATAGAAGATATTAACTCCAATAGAAGCATTCTCCCTGGCATTGAGCTTCAGGTTATTTTTCACGACACAAATTGCAACGGGTTTCTTGGAACAATGGAAGCTCTGCAGTTGATGGAGAATGATGTCGTCGCCACAATTGGACCACAGTCTTCTTCAATAGCTCATGTCGTCTCCCATGTGGCTAATGAACTTCATGTACCTCTTCTATCATTTGCTGCAACTGATCCTACTCTATCTGCACTTCAGTATCCATATTTCGTCCGAACCACTCACAGTGACTACTATCAGATGTATGCAATCGCTGACTTTGTCGAATATTTCAGATGGAGGGAGGTAATTGCCATTTTTGTAGATGATGATAATGGAAAGAATGGAATTTCTGTGTTGGGTGATGCATTGTCAACGAAGCGTGCCAAGATCTCTTATAAGGCTGCACTCCCTCTTGGGGCCAACAGAAGTGATGTCAGTGACTTGTTGAGTGAAGTGAACTTAATGGAATCAAGAATCTATGTTCTACATGTTAATCCTGGTTCTGGTTTGTCAATCTTTCGTGTTGCGAAGCAGCTAGGAATGATGAGCAATGGCTATGTTTGGATTGCAACAGATTGGCTTCCTCCGGTTCTGGATTCATCCGAGACACCAGACAGTGACACAATGAATGTTCTAGAAGGTGTTGTGGCTTTTCGCAATCACATTCCTGATACTGATATGAAGAAGAGTTTGATCACTAAATTGAAACGTCGAAAGGACAAGCAGACTTCAAGCTTCAATTCCTATGCATTCTATGCATATGATTCTGTCTGGTTAGCAGCTTATGCCCTTGACATTTTTCTCAATGAAGGTGGGAATATATCTTTCTCCAGTGACCCTAGATTGCATGACAATAATGGAAGCACCTTGCATTTAGAATCACTTCGCACTTTTGATAGTGGCCCTCAGTATCTGCAAACTATTTTAAGAACAAACTTCACTGGTTCGAGTGGTCGAATTGGGTTTGATACAGATAGGAATTTAATCCGTCCGGCATATGATATTCTGAATATTGTCGGATCTGGATTGCGTAGAATTGGTTACTGGTCTAATCACTCTAGTTTGTCAGTTGTAGCTCCTGATATTTCATATGCAAAATCATCCAACCATTCTTCTAAAAGCACTCAACAGCTTTATAGTGTGATATGGCCGGGAGATGCTAAAACTACACCAAAAGGATGGGTATTCCCCAACAATGGAAAGCCATTGCGGATAGCAGTGCCGAATCGAGTAAGCTACAAGGAGCTCGTTGCCAAAGACAAGAGTCCTACAGGAGTACAAGGCTATTGCATTGATGTCTTTGAAGCGGCGTTGAACTTGTTGGCTTATCCCGTCCCACGACAATATATATTGTATGGAAATGGTGAAAGGAATCCTAGCTACAATGATCTTGTAGATCAAGTTGCACAAAATAACTTTGATGCAGCTGTTGGAGATGTCACAATTGTCATGAACAGAACAAGGTTTGTGGATTTTACTCAGCCTTTTATGGAATCAGGGCTTGTTGTTGTTGTTCCTGTCAAGGAGGAGAAGTCAAGCCCCTGGTCTTTCCTTAAGCCATTCACAGCTCAAATGTGGTGTGTTACTGGTGCTTTCTTTCTTTTCGTGGGAACTGTTGTGTGGATCCTCGAGCACCGGCTCAATCACGAGTTCCGCGGTCCACCAAGGAAGCAACTAATAACAGTCTTTTGGTTTAGTTTGTCAACAATGTTCTTCTCACACAGAGAGAACACTGTGAGTGCTCTCGGGAGACTGGTGCTAATCATATGGCTATTTGTGGTGTTGATTATCAATTCAAGCTACACAGCTAGCTTGACATCAATCCTAACCGTGCAGCAGTTATCGACACAAATCGAAGGAATTGATAGCTTGATCTCTAGTAGTCAACCAATCGGAATTCAAGACGGGTCATTTGTGAAGAAGTATCTGACAGATGAACTCCACATAGCAGAATCTAGGATAGTTACATTGAAAAACATGGAGGCTTATATCGATGCTCTTCAGCGTGGGCCGAGCAATGGAGGGGTTGTGGCGGTTGTTGATGAACTTCCTTATATTGAGATCTTGATGGCCAATACTGAGTGCAAGTTTACAACTGTTGGCCAGGAGTTCACTAAAAGTGGCTGGGGATTTGCATTCCAGAGGGACTCTCCCCTCGCCGTTGACATGTCAACGGCGATTCTTGAACTCTCGGAGAATGGGGACCTGCAAAGGATCCATGACAAATGGCTTAATAAGAAGGAGTGTGCAAGCAATGATGCTGATTCAAACAAACTATCTTTGAAAAGCTTCTGGGGCCTCTTCCTTGTGTGTGGCATTACTTGTTTCCTTGCACTGATTGTATTCTTTGTTAGAGTGTTCTGTCAATACACAAAGTTCATCCCAGAGCACGAAGAAGCCGACGAGGAGATTCAACAACCGGTCCGGCGGCGTAGAAGGGCAACCAAAACTCCTAGCTTCAAGGAATTGATTGTTTTTGTAGATAAAAGAGAAGCAGAAATTAAAGAGATACTGAGACAGAAGAGTAGAAAGAGGCAGCGCAGCAAAAGTTTAGATGATAACTCAAATTCACCAGTCTAA 2820 0.4252 MVIGTRWFLFMLALCLWIFRNEGVGITGPSPNTTVNSTVSSSRPKVVKIGVLFTLDSIIGRSAKPAVMAAIEDINSNRSILPGIELQVIFHDTNCNGFLGTMEALQLMENDVVATIGPQSSSIAHVVSHVANELHVPLLSFAATDPTLSALQYPYFVRTTHSDYYQMYAIADFVEYFRWREVIAIFVDDDNGKNGISVLGDALSTKRAKISYKAALPLGANRSDVSDLLSEVNLMESRIYVLHVNPGSGLSIFRVAKQLGMMSNGYVWIATDWLPPVLDSSETPDSDTMNVLEGVVAFRNHIPDTDMKKSLITKLKRRKDKQTSSFNSYAFYAYDSVWLAAYALDIFLNEGGNISFSSDPRLHDNNGSTLHLESLRTFDSGPQYLQTILRTNFTGSSGRIGFDTDRNLIRPAYDILNIVGSGLRRIGYWSNHSSLSVVAPDISYAKSSNHSSKSTQQLYSVIWPGDAKTTPKGWVFPNNGKPLRIAVPNRVSYKELVAKDKSPTGVQGYCIDVFEAALNLLAYPVPRQYILYGNGERNPSYNDLVDQVAQNNFDAAVGDVTIVMNRTRFVDFTQPFMESGLVVVVPVKEEKSSPWSFLKPFTAQMWCVTGAFFLFVGTVVWILEHRLNHEFRGPPRKQLITVFWFSLSTMFFSHRENTVSALGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSTQIEGIDSLISSSQPIGIQDGSFVKKYLTDELHIAESRIVTLKNMEAYIDALQRGPSNGGVVAVVDELPYIEILMANTECKFTTVGQEFTKSGWGFAFQRDSPLAVDMSTAILELSENGDLQRIHDKWLNKKECASNDADSNKLSLKSFWGLFLVCGITCFLALIVFFVRVFCQYTKFIPEHEEADEEIQQPVRRRRRATKTPSFKELIVFVDKREAEIKEILRQKSRKRQRSKSLDDNSNSPV 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01504 939 Gene3D - 594 715 - -
Arst3g01504 939 FunFam Glutamate receptor 162 329 - -
Arst3g01504 939 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 47 889 IPR015683 -
Arst3g01504 939 Gene3D - 66 410 - -
Arst3g01504 939 PIRSF IGluLR_plant 6 938 IPR017103 -
Arst3g01504 939 PIRSF IGluLR_plant 6 938 IPR017103 -
Arst3g01504 939 Pfam Bacterial extracellular solute-binding proteins, family 3 538 825 IPR001638 -
Arst3g01504 939 Gene3D - 716 829 - -
Arst3g01504 939 Coils Coil 907 927 - -
Arst3g01504 939 SMART GluR_14 484 826 IPR001320 GO:0015276|GO:0016020
Arst3g01504 939 CDD GluR_Plant 481 824 - -
Arst3g01504 939 Pfam Receptor family ligand binding region 64 420 IPR001828 -
Arst3g01504 939 CDD PBP1_GABAb_receptor_plant 48 439 IPR044440 -
Arst3g01504 939 Gene3D - 476 593 - -
Arst3g01504 939 FunFam Glutamate receptor 478 594 - -
Arst3g01504 939 SUPERFAMILY Periplasmic binding protein-like II 458 826 - -
Arst3g01504 939 SUPERFAMILY Periplasmic binding protein-like I 41 475 IPR028082 -
Arst3g01504 939 FunFam Glutamate receptor 594 724 - -
Arst3g01504 939 Pfam Ligand-gated ion channel 826 854 IPR001320 GO:0015276|GO:0016020
Arst3g01504 939 FunFam Glutamate receptor 720 828 - -
Arst3g01504 939 Gene3D - 162 434 - -
Arst3g01504 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 60 76 - -
Arst3g01504 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 120 148 - -
Arst3g01504 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 333 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01504 Arst-Chr3 13809698 13814586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01504 43 791 Ion Channels AT1G05200 65.955 0.0 1069
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01504 K05387 - gmx:100802782 1405.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01504 3 13809698 13814586 Arst3g01504 3 13809698 13814586 ECH
Arst8g02144 8 30230068 30233795 Arst3g01504 3 13809698 13814586 PCT
Arst3g01504 3 13809698 13814586 Arst8g02142 8 30228975 30233795 PCT