Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01474 ATGGAGTGGAGTAGAGGACACACTATAGGCCATGGATCCTCAGCTACCGTATCTATAGCCACCCGCCGTGAGGGCTGCCGTGTATTCGCCGCGAAGTCATCGGAGCTATGCAATTCAGAATCTTTACAAAGAGAACAGAGGATTTTATCTTCTCTATGCTCTCCTTATGTGGTTAATTTCAAAGGGAGTGACATAACCATGGAGAACAACAAGCTCTACTACAATCTCTTCATGGAGTACATGCCATTCGGAACCCTTTCCTCGGAAATTAACCGGCACGGCGGCCGGCTCGATGAGGCAAAAATTAAGACCTACACAAGGCAAATTGTGCAGGGGCTAGAGTATATACACTCTAAAGGGTTGGTACATTGTGACATAAAATGTTCCAACATCTTAATTGGCACCGAAGGCGCCAAAATTGGTGACTTGGGATGCGCCAAGAGTGTCGTGGATCCGCGAATCAGCGGCACTCCGATGTTGATGGCGCCGGAAGCGGTGCGGGGAGAGGATCAAGGGTGTGCTAGTGATATTTGGTCACTTGGGTGCACCATAATTGAAATGGCTAAAGGTGAAGCAGCGTGGCCTAATTTGTTGGACCCATTTTGTGTTCTTTATCACATTGCATATTCCGGTGAAGTTCCTGAGATTCCATGGTTTCTATCTGAAGAAGGTAAGGATTTCTTGGGGAAGTGTCTAAGGTGGAATCCAGAAGAGAGGTGTACCGCTACTCAACTTCTTAATCATCCTTTTCTCAATTCCAAGGTGGAATCAAATTCAACATCGCCAACAAGTATTCTTGAGCATGGGTTTTGGAGCTGTGTGGAAGAAGGTTCTCACACAACAAGAACAACAAGCCTTGGGGATTTGCCACCTGACAGGGTTAGAATGTTGGGTTTGTGTTCAGAGGAATCATGTTGGGCATCATGGAATGATGATGGGAACTGGATCACAATTAGAGGGAATGAGTGTGACTCATGGGGTGAAGGGGTTTTTCGTAATTTTGGGTCAGAGACAGCTTCTAGTAGTAATGGTGGTTTGGATCTGAAGGAGTTGGTGGAAAGCAATGTGAGTGGTAGAATTTGGAGTAAACAATAA 1095 0.4584 MEWSRGHTIGHGSSATVSIATRREGCRVFAAKSSELCNSESLQREQRILSSLCSPYVVNFKGSDITMENNKLYYNLFMEYMPFGTLSSEINRHGGRLDEAKIKTYTRQIVQGLEYIHSKGLVHCDIKCSNILIGTEGAKIGDLGCAKSVVDPRISGTPMLMAPEAVRGEDQGCASDIWSLGCTIIEMAKGEAAWPNLLDPFCVLYHIAYSGEVPEIPWFLSEEGKDFLGKCLRWNPEERCTATQLLNHPFLNSKVESNSTSPTSILEHGFWSCVEEGSHTTRTTSLGDLPPDRVRMLGLCSEESCWASWNDDGNWITIRGNECDSWGEGVFRNFGSETASSSNGGLDLKELVESNVSGRIWSKQ 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01474 364 Gene3D Transferase(Phosphotransferase) domain 1 2 285 - -
Arst3g01474 364 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Arst3g01474 364 ProSiteProfiles Protein kinase domain profile. 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01474 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Arst3g01474 364 SMART serkin_6 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01474 364 SUPERFAMILY Protein kinase-like (PK-like) 3 268 IPR011009 -
Arst3g01474 364 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 278 - -
Arst3g01474 364 Pfam Protein kinase domain 5 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01474 364 CDD STKc_MAPKKK 2 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01474 Arst-Chr3 13282368 13283608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01474 1 321 MAP Kinase Kinase Kinase AT1G05100 49.706 2.16e-100 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Arst3g01474 Pkinase 1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01474 K20716 - gmx:100819665 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01474 3 13282368 13283608 Arst4g00649 4 4770905 4772445 ECH
Arst3g01474 3 13282368 13283608 Arst3g01474 3 13282368 13283608 ECH
Arst8g02111 8 29817138 29818481 Arst3g01474 3 13282368 13283608 PCT