Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01459 ATGGGAGGAGATGCTGGACTCTCCATGGATTCCTCCGATCCGATCCGGAGGTTCTTCCTTCGCAGTAATAGCCCTGTTATTCTCAACTCTTTTCCTGAACACAAGTGGAATATGAACCTCAACACGGATCATGAAACCGCCTCTTTTCAACAAGTCAACCTTATTAGTTCTTGTTCTTCGAGTCACGATCATCACCACAACACGAGACAAGAGTTAGACTTCTTCGTCACTCACAACGACGACAACCTTATCGCCTCTTCTTCTTTCCCTGCCGCCGACCACGATGACAATCATCGTCATTCCTTGGAATTCAAAGTGAACACTGGTCTGAATCTTCTCACTACCAGCACTACGGAGGACGATCACGTAAATTTGCAAGACAGAAGAACTAAACTTGAGGAGGTAGGTGTAATTGAAGCGGAGATAGAGCGAGTGAAGGAGGAGAATGAGAGGATAAGGGAGATGATTGATGAGGCAAACAGTCATTACAGTGCGCTTCAGATGCACCACATGAATCTGATGAACAAGAGCAGTGATGATGAAAGAGTATTGGTTCCAAGGCAGTTTATGGATCTTGGCTTAGCAACAAATTCGCACAATTGTTCATCATCAAGATCAAAATCACCATCAGGGAATAGTAGTGGTGATGGAGAGAAGAAGAGAATGAAAAGAGAAGAAAGCCCGACGAGGGAAGAAGAAGCTAACAAAAGTAGTCCAGCAAAACATAATCTTGACCAAGCTCACGAGGCCACTATGAGGAAAGCTAGAGTTTCTGTTAGAGCGAGATCAGAGGCACCTATGATAACTGATGGGTGTCAATGGCGGAAGTATGGACAGAAGATGGCTAAAGGAAACCCATGCCCTCGAGCTTATTATCGTTGCACCATGGCTTCCGGTTGTCCAGTTAGGAAACAGGTGCAAAGGTGTGCAGAGGACAGAACAGTGTTAGTGACAACATATGAAGGGAAGCACAACCACCCTTTGCCACCAGCAGCAATGGCTATGGCGCAAACAACTTCCTCAGCCGCAACAATGCTTCTTTCTGGTTCATCAATGTCAACCAATGACAACACCACCCTAATCAACAATGCAACAAACTTCTTAGCAACAACACTTCTTCCATCTTCTTCATCATCATCATCAGCTGCTACTTCAACCATGGCAACAATCTCAGCTTCAGCACCATTCCCAACTATCACATTGGACCTTACTCATGATGACTCCCCCAACAACAACAACATCAACAACAACAACCCTTTTCAGTTCCCAATAAGGCCTAGTACAATTCCACAAATACCCTTCCAGATATTTGGTGGTAATAGTAGTCATAATAATAGCAATAACCAATCAAAGTTTTGTGGTCTACAAATGCCTAATAATAATAATAAAGATCATAGTAATAGTAGTAGTAGTAGTAATAATCTTGTTGATACAGTTGGTGCTGCAATTGCATCTGATCCAAACTTCACTGCTGCTTTGGTATCAGCTCTTAGCTCCTTTATTAGTGCTGCTGCTCCTACTCAACAAAACAACATTAGCAATAGCAATGACAATGGCAATGGCACACTCAACAACAATAGCTAG 1584 0.4318 MGGDAGLSMDSSDPIRRFFLRSNSPVILNSFPEHKWNMNLNTDHETASFQQVNLISSCSSSHDHHHNTRQELDFFVTHNDDNLIASSSFPAADHDDNHRHSLEFKVNTGLNLLTTSTTEDDHVNLQDRRTKLEEVGVIEAEIERVKEENERIREMIDEANSHYSALQMHHMNLMNKSSDDERVLVPRQFMDLGLATNSHNCSSSRSKSPSGNSSGDGEKKRMKREESPTREEEANKSSPAKHNLDQAHEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMASGCPVRKQVQRCAEDRTVLVTTYEGKHNHPLPPAAMAMAQTTSSAATMLLSGSSMSTNDNTTLINNATNFLATTLLPSSSSSSSAATSTMATISASAPFPTITLDLTHDDSPNNNNINNNNPFQFPIRPSTIPQIPFQIFGGNSSHNNSNNQSKFCGLQMPNNNNKDHSNSSSSSNNLVDTVGAAIASDPNFTAALVSALSSFISAAAPTQQNNISNSNDNGNGTLNNNS 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01459 527 MobiDBLite consensus disorder prediction 402 425 - -
Arst3g01459 527 MobiDBLite consensus disorder prediction 508 527 - -
Arst3g01459 527 Pfam WRKY DNA -binding domain 270 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g01459 527 MobiDBLite consensus disorder prediction 214 260 - -
Arst3g01459 527 FunFam probable WRKY transcription factor 31 253 330 - -
Arst3g01459 527 MobiDBLite consensus disorder prediction 195 262 - -
Arst3g01459 527 SUPERFAMILY WRKY DNA-binding domain 261 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst3g01459 527 Coils Coil 135 162 - -
Arst3g01459 527 MobiDBLite consensus disorder prediction 402 473 - -
Arst3g01459 527 SMART WRKY_cls 268 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g01459 527 Gene3D WRKY domain 253 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst3g01459 527 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 115 513 IPR044810 GO:0003700
Arst3g01459 527 Coils Coil 525 527 - -
Arst3g01459 527 MobiDBLite consensus disorder prediction 195 213 - -
Arst3g01459 527 MobiDBLite consensus disorder prediction 433 473 - -
Arst3g01459 527 ProSiteProfiles WRKY domain profile. 263 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01459 Arst-Chr3 13122568 13125205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01459 71 501 WRKY Transcription Factor Family AT1G62300 45.791 3.83e-107 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst3g01459 WRKY 5.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01459 - - ahf:112737496 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01459 3 13122568 13125205 Arst1g03631 1 97587734 97592114 ECH
Arst3g01459 3 13122568 13125205 Arst3g01459 3 13122568 13125205 ECH
Arst7g00256 7 1609253 1614915 Arst3g01459 3 13122568 13125205 PCT