Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01451 ATGTTCAACGGAATGATGGATCCTGAGTTGATCAGAATCGCTCAGGAACAGATGAGTCGCATGTCACCCGCTGAGTTGGCTCGGATCCAACAACAGATGATGTCTAATCCTGATCTGATGAGGATGGCTTCAGAGAGCATGAAGAACATGAAGCCTGAAGACTTTAAACTCGCTGCAGAACAGTTAAAGCATACTCGTCCTGAAGATATGGCTGAGATCGGTGAGAAGATGGTTAATGCATCACCTGATGAAGTAGCAGCTATGCGCTCCCGTGTTGATGCACATATCAAATATCAATTGAGTGCAGCTGAGTTGTTGAAGAAGCAGGGCAATGAGCTTCATAACAAGGGGAAGTTCACAGATGCTTTGGAGAAGTATTCTCGCGCTAAAGAAAATATTAAAGAGATTCCCTCTTCTGAAAGTAGAAAACTTCGTTTGGCATGCTCACTCAACTTGATGTCCTGCTACCTAAAGACAAAGCAGTACAATGAATGCATAAAAGAAGGTTCTGAGGTTTTGGAATGCGATGCAAATAATCTTAAGGCTCTTTATCGGAGAGGGCAAGCATATAAAGAACTGGGTTTACTAAGGGATGCTGTTACTGATTTAAGCAAAGCACTTGAAGTGTCCCCTAATGATGATACAATTGAAGAGCTTTTAAGGGACACCAAGGAAATGTTGACAAAGGAAGGTGGTGACTGCGCTCCTGGAGGATTAGTAATCGAAGAAATCACTGAAGAAATCGAGAATGTGCCTTCTGGAAACAACAAAAGCTCTTCTTCAGAACAAAAGGTGGTTCAACCAAGAAAGTCCAGTGAATCCTCAAATAGTTCTAATACAGTAAATGGAAATCCAATAACAAATGCCGAGAGTATAGATAAGTTGAAAAATGATCCAGTAGCTATGAGATCTTTCCAAAACTTCATTTCAAATGCCGATCCTGCAACTCTGGCTTCTTTAAATCCTGGACAATCCAATGATATATCCCCAGAGATGATGAGAACTGCTACAAATATGATTGGAAAAATGTCTCCTGAGGAACTTCAAAAAATGCTTGAAATGGCTTCTTCATTCCAAGGGGACAACCCAATTTTAAGGGGAGGTTCCCCCAATTCTCCTTTCAACCCTGGATCAATTCCTCCCAACATATCACCTGATATGTTAAAAACAGCAAGTGATATGATAGGTAAAATGTCACCAGATGACCTTCAGAAGATGTTTGAAATGGCTTCCTCGTTGAACGGGAGAGGATCTGTTCCATTGTCAGCACCTGTAGACAATACTGAAAGAAGTTCTTCCCGGTCGGACTTACCATCCTCGAGTACTAGTGAAACTAGTGTTTCTGGAGAGTCAAGTTCTTCTCAAAATGTCTTCCCAAATATGAGAAATGCTTCTCAGCCGAACTTCCCTTCCTCGACCACAGATTTGCAAGAACAGATGAGAAATCAGATGAAGGACCCAGCTATGCGGCAGATGTTCTCATCAATGATTAAAAATATGAGTCCAGAAATGATGGCAAACATGGGCGAACAATTTGGTTTCAAGCTTTCACCCGAGGATGCAGCAAGAGCTCAGCAAGCCATGTCATCCTTATCGCCAGAGAGCTTGGATAAAATGATGGTTTGGGCAGACAGGGTTCAAAGAGGAGTTGAAGGTGCAAAAAAGACGAAGAACTGGCTGCTGGGGAAACCTGGCATGATCTTGGCAATATGCATGCTCATTTTGGCTATCATTCTTCATCGATTCGGCTTCATTGGTAGCTAG 1764 0.4223 MFNGMMDPELIRIAQEQMSRMSPAELARIQQQMMSNPDLMRMASESMKNMKPEDFKLAAEQLKHTRPEDMAEIGEKMVNASPDEVAAMRSRVDAHIKYQLSAAELLKKQGNELHNKGKFTDALEKYSRAKENIKEIPSSESRKLRLACSLNLMSCYLKTKQYNECIKEGSEVLECDANNLKALYRRGQAYKELGLLRDAVTDLSKALEVSPNDDTIEELLRDTKEMLTKEGGDCAPGGLVIEEITEEIENVPSGNNKSSSSEQKVVQPRKSSESSNSSNTVNGNPITNAESIDKLKNDPVAMRSFQNFISNADPATLASLNPGQSNDISPEMMRTATNMIGKMSPEELQKMLEMASSFQGDNPILRGGSPNSPFNPGSIPPNISPDMLKTASDMIGKMSPDDLQKMFEMASSLNGRGSVPLSAPVDNTERSSSRSDLPSSSTSETSVSGESSSSQNVFPNMRNASQPNFPSSTTDLQEQMRNQMKDPAMRQMFSSMIKNMSPEMMANMGEQFGFKLSPEDAARAQQAMSSLSPESLDKMMVWADRVQRGVEGAKKTKNWLLGKPGMILAICMLILAIILHRFGFIGS 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01451 587 Gene3D Tetratricopeptide repeat domain 89 231 IPR011990 GO:0005515
Arst3g01451 587 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Arst3g01451 587 SMART tpr_5 146 179 IPR019734 GO:0005515
Arst3g01451 587 SMART tpr_5 180 213 IPR019734 GO:0005515
Arst3g01451 587 SMART tpr_5 103 136 IPR019734 GO:0005515
Arst3g01451 587 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 4 364 - -
Arst3g01451 587 MobiDBLite consensus disorder prediction 424 478 - -
Arst3g01451 587 MobiDBLite consensus disorder prediction 249 292 - -
Arst3g01451 587 SUPERFAMILY TPR-like 95 225 IPR011990 GO:0005515
Arst3g01451 587 MobiDBLite consensus disorder prediction 249 291 - -
Arst3g01451 587 ProSiteProfiles TPR repeat region circular profile. 180 213 - -
Arst3g01451 587 Pfam Tetratricopeptide repeat 181 213 IPR001440 GO:0005515
Arst3g01451 587 MobiDBLite consensus disorder prediction 414 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01451 Arst-Chr3 13031765 13036627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01451 93 227 Calmodulin-binding Proteins AT5G48570 35.461 2.47e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01451 - - gmx:100800315 837.41