Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01411 ATGATCCCCATCCGCACTGGCTTATATGTTCGAGGCTTGGAGCAGGACGCCTTCGTCTCATCGGTCCCCGTCGTGTCGTCGGTCGCCGTCCGGTTCTCCGTCGAAGTTTTTTCAGTTGTTGGTAGAATGGAGGAGGAAGATGTAGCCTCGTTAGTTCATGGTGCACCGGCCATGGCCGATGAAGTTTCCTTTGTCGGGAACGAAGAAGAACTAGTTTCCGATGAGCCATATGTTTGTGTAGGCGATGAACCTTCATCAGAGGCAAGTGAGGATGCGAATATGGACGGGTATTGTGGCTATAATGATGGTGATGATTTTTACGAAAGCTGGGAAGACAGAGGCATTGATGGGATTGCTGACTTTGGCCGAATTAACTTTAAAGAAATAAGTTTTGATGAGATGAGATTGCTACATTTTCCCGATCGACATGTAGCTTTTGCTTTCTACAATTTATATGCAAAAATGAATGGGTTCGCCGCAAGGAAGACCAGGCTAAGGCAAAATGCCAAGAAACTGGCGACACAACAGCAGTTTGTTTGCTTTAGGCAGGGGTTCAGAGAATTTGCCGCGGATAAGGAGGCATACGAACGTAAGCGGGAGCCTAAGCCTGAGACTAGATGTGGCTGTTTGGCGCAGATGCGTGTTCATCTACATTTGGAGAGTGGTAGATGGATTATTTCATACTTTGATAATGTTCACAACCATGAGATGCTCGACGGAACACTTACATTTATGCTCCCTGGTCATAGGAAGATGAATTCTACCGCAATTGAACAAATGAACATGATGTTGAGAGTCGGGATTAAAACACCACAGATATATTCAGCATTTGTGCATACTGCAGGGGGCTTCCAAAATGTACCATTTTTGAAGAGAGACATGTACAACCAGATTGATAAACAGAGAAAGCTAATAGGGGGCGATGCGGTGTCTTGTCTTCGGTGGTTGGAATCATATGCAGAGGAGAATCCTGGAACGTTTGTGCGTTACTTAGCAGACAAAGAGAATCGTTTGGTGCACCTTTTTTGGTCTGATAACTGTAGTCAATTAGATTACCATGTGTTCGGAGATGTTGTAGCATTTGATGCAACTTATCGAAAGAATAAGTACATGTGCCCACTGGTTGTGTTTTCTGGCGTAAATCACCATAACCAAACCATTATTTTCGCTGCTGCCCTTGTTGCAAATGAGAGTGAGGAGACATATTCTTGGCTACTTGAAAGATTTTTGGAAGCTATGAAGGGGAAAGCTCCTGCGTGTGTTATCACAGATGGGCACGCGGCAATGAGAAAGGCGATTGAAAAGGTATTTCCTATGGCTTATCATCGTCTCTGTGCATGGCATCTCCTTCGGAATGCAACATCACATTTGGCAAATCCAGCATTCACTTCTGAGTTTAAGAAATGCATGCTTTTTGATTATGAGGTTTCAGAGTTTGAAGCCAGGTGGGAGAGATTGGTCACTGAGCTTCAGCTTCAGGATAATCAGTGGGTCTGTGACCTTTATGATCGGAGGAAAATGTGGGCAACGGCTCACATTCATGGCCACTTTTTCGGTGGATTTCGGACGACATCAAGATGCGAGGGTTTGCATTCGATGCTTGGTAAGTTTGTCCACTCCCGCCATAATTTGAGGAACTTTGTTGAACAATATTTTCGCTGTGTATCAGAGATGAGATCTCGGGAAGCACAATCCGATATGCATAGCGTGGTTGGACACTTGGTGTTGCAAAGTCCGTTACATGATTTGGAAAGGTCTGCTGCAAAGTTACTAACGAAGGAGATATTTATCTTATTTCGGCCCATGCTGTCCCGTGCATGTACATTAAAGGTCCGGTCTTGTACATTGACTCCGACATCGGACATATACACCATTTCACGGTGGGGCAATTCACACAACAACTGGCATGTTTCGCACTATCCCGAGGATTCAATATTTAAATGCTCTTGTTTAAGGATGGAATCCCTTGGAATACCATGCGATCACATTGTAGCTCTTCTTGTACATCTTGATTTCACGGAAATCCCAACAAGTCTTGTTTTGGAGAGGTGGTCTAAGAACGCTCGGTCGAAGATGAGGCAATATGTTGAGAAGGGACCGTTTAGCTGGGACTCTATGGTAAGTTGTCGCAATTGGATGCTGAACGACCTATGTAGGGAGATGTGTGTGCTTGCTTCAGTGAGGGAGGATAAATTTGAAACAATGACTGAGAAGATACGCAGTGAGATCAATCGATTAAAGCATGACACCGAAGCTGGGCCTTCGACACCCGCGGTTGTTGGCCAATCATCCACACTCGAGGGGTGCGTTCAAAACCCACTTGTTGTGCGTCGCAAGAAGAGGCCAAAGAGGGACTCAGTTAACCGTACCTTGGTTAGGGGTGTGAGACGGTGCAGCATTTGTCATCGGGTTGGGCATAATCGAACTTCTTGCCAGTCAAATGTTTGGCAGGGCCAGCGGCAGCAGCCTAGCCACGAGGAAGACGTCGATGAAGATAACTACTACACTCTTAACTTTGGGGAGGAAGTTGATGATGAGTATGCTCATTATCATTCTCAACCCGTGGGGCAAGAGGAACACTTTGGCCGGTATGAAGAGGAGTTCCAAGTGCCATTGACGGATCCTTATTATAGTTGGCATGAGTAG 2646 0.4554 MIPIRTGLYVRGLEQDAFVSSVPVVSSVAVRFSVEVFSVVGRMEEEDVASLVHGAPAMADEVSFVGNEEELVSDEPYVCVGDEPSSEASEDANMDGYCGYNDGDDFYESWEDRGIDGIADFGRINFKEISFDEMRLLHFPDRHVAFAFYNLYAKMNGFAARKTRLRQNAKKLATQQQFVCFRQGFREFAADKEAYERKREPKPETRCGCLAQMRVHLHLESGRWIISYFDNVHNHEMLDGTLTFMLPGHRKMNSTAIEQMNMMLRVGIKTPQIYSAFVHTAGGFQNVPFLKRDMYNQIDKQRKLIGGDAVSCLRWLESYAEENPGTFVRYLADKENRLVHLFWSDNCSQLDYHVFGDVVAFDATYRKNKYMCPLVVFSGVNHHNQTIIFAAALVANESEETYSWLLERFLEAMKGKAPACVITDGHAAMRKAIEKVFPMAYHRLCAWHLLRNATSHLANPAFTSEFKKCMLFDYEVSEFEARWERLVTELQLQDNQWVCDLYDRRKMWATAHIHGHFFGGFRTTSRCEGLHSMLGKFVHSRHNLRNFVEQYFRCVSEMRSREAQSDMHSVVGHLVLQSPLHDLERSAAKLLTKEIFILFRPMLSRACTLKVRSCTLTPTSDIYTISRWGNSHNNWHVSHYPEDSIFKCSCLRMESLGIPCDHIVALLVHLDFTEIPTSLVLERWSKNARSKMRQYVEKGPFSWDSMVSCRNWMLNDLCREMCVLASVREDKFETMTEKIRSEINRLKHDTEAGPSTPAVVGQSSTLEGCVQNPLVVRRKKRPKRDSVNRTLVRGVRRCSICHRVGHNRTSCQSNVWQGQRQQPSHEEDVDEDNYYTLNFGEEVDDEYAHYHSQPVGQEEHFGRYEEEFQVPLTDPYYSWHE 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01411 881 Pfam MULE transposase domain 358 452 IPR018289 -
Arst3g01411 881 ProSiteProfiles Zinc finger SWIM-type profile. 635 671 IPR007527 GO:0008270
Arst3g01411 881 SMART 26again6 646 673 IPR006564 GO:0008270
Arst3g01411 881 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 138 745 IPR031052 GO:0006355
Arst3g01411 881 Pfam FAR1 DNA-binding domain 148 238 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01411 Arst-Chr3 12540257 12543734 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst3g01411 MULE 5.2e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01411 - - ahf:112717731 1102.43