Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01405 ATGGCAGCGTACTTTCATGGCGGCAACAATAACAACAACAGTGGCAGTTCGGATATTCATCATCATCAATCTTCCGCAGAAGGAGGGGGATTGCAGACACTGTTCCTCATGAATCCAAACAACTACGTACCTTTCTCCTCTGACACCGCACAAAATCCAACACCAAACATGCTCTTCCTCAATCCCAACAACAGTACTACTACTCCCCACGCGCTCAACCTCGCAAGTCTCTCTCACGCGCCGCCCCAACAACAAATTATCGGGGTTGCTTCAAATAATATCCTAGGACCTGCCGGCGGTGGCAATGAGATCTCCGGCTTCCATGGCTTTGTGGGGCCCACACCACGTGTTCATCACTACAATTGGAGATCCATCATGGATCAAACTGATCTTTCTTCTTCCTCTTCTTCTGTTGTTGCAGCAACCGTGACTGTTCTTCCGAATAATTATTCGGAACATACAGTGACAACTGCAACAACAGAAATGGAATTTCATAGAGCGAGAGTCCATCAATCCCATCATCATCCGCAAGGGTTGTCACTTAGTCTTTCCTCTCAACAACTTCCGTTTAGGTCTTTTTCCAACGCCGGTGGGGCTTTGAATAGTGTTGTACTTGGATCCAAGTTTCTGAAAGCGGCACAGGAGCTTCTTGATGAAGCCGTTAACGTGGGTAACGATAATAAGGTGGATTATTCCAACAATAAAGAGAAGATGAAAGGGAATAAAAATGTTGAATCCACGTCTGATGGTGGCGGTGATGATAATAGATCAAGTGGTGGCGGCAGCGGCGGTGAAAATAGTGGTGGTGACAACAAGCAAGGAAGTGAACTCAACACTGCTCAAAGACAAGAACTTCATATGAATAAGTCCAAGCTTGTTACCATGCTTGATGAGGTGGAGCAAAGATACCGAGAGTACAAACAACAAATGCAAATTGTGACGTCATCATTTGAGGAAGCAGCTGGTTATGGAGCTGCAAGAGCATACACAGCACTTGCATTGAAGACAATATCGAAGCAATTTCGGTGCCTAAAAGATGCAATTTGTTTGCAGATCAAAACGACGGGCAAGACGCTAGGTGAAGACAACTGCATGGGAGTTAAAATGGAGGGTTCAAGGCTTAGATTCATTGATCACAATCTCCGGCAACAAAGGGCGCTTCAACAGTTGGGAATGATACAACACAATGCTTGGAGACCACAAAGAGGATTGCCCGAACGAGCGGTTTCTATTCTTCGAGCTTGGCTTTTCGAACATTTTCTTCACCCTTATCCAAAGGACTCCGATAAGGTTATGCTTGCAAGACAAACTGGACTTACTCGGAGCCAGGTATCAAACTGGTTTATAAATGCCCGAGTTAGGCTATGGAAACCAATGGTTGAAGAAATGTACTTAGAAGAAATTAAGGATCAACAACACAACAACAATAATGGCTCCCAAGATGATGATGATGATGACATTGACACCACCACCAACAAGAAGAAGAAGAAGAAGCTAATAAGAGAATCATCAAACAAGGAATTATGGTCATCATCATCATCACAATTAGAACAACCACCATGTAGTAGTAGTGCCATTAGACTTGACCACTTAAACACCAACCAAAACAACACTACTCCAATGACTGAGATCTCACCAAATTCCAACAACAATAACAATTCAATCTCAACATCTCCATTGAATCTAAGGAATCCTCATCATGAGATTATGAACTCTCCAGCAGGTAGCATCCTTTCTGTGGACATGGAAATGAAGCCGATAAGAGAGACAAATAGCAACAACAACAACAACGTCAATTTTGGAATTGAATTAGGGAACCCTAATAAAGACGGTTACCCTTTAATGGCTTCTTTTGGGAATGAAAACCACGACGGTGGCGGCGGTAGCGGTAGCGGTTATGGTTCTACTACATTCTCCATGGATGACATTGGAAGGTTCCATCAACAATTGGTGGCTCCAAGGTTCCATGGGAATGGTGTTTCACTCACTCTAGGGCTTCCACCAAGTGATAACAACAACACCAACAATAACTTTCCATCGCAACAAGTAGGGTTTCTCTCCTCACACAACATGCATTTGGGAGGAGGAAGGATTCATCATCATCATCACGAGATTGAAGCAGCAACCAATGATGACGAGTTTTGTGGAATGAAGAACAATGCCACAACACCTTCTTCTCATTCAGGAACAAGTTATGATCATAATAACAACAACATTGACATGCAAAATCCCAAGAGGTTTGCTTCTCATCAATTGTTGCGTGATTTTGTGGCCTAG 2277 0.4343 MAAYFHGGNNNNNSGSSDIHHHQSSAEGGGLQTLFLMNPNNYVPFSSDTAQNPTPNMLFLNPNNSTTTPHALNLASLSHAPPQQQIIGVASNNILGPAGGGNEISGFHGFVGPTPRVHHYNWRSIMDQTDLSSSSSSVVAATVTVLPNNYSEHTVTTATTEMEFHRARVHQSHHHPQGLSLSLSSQQLPFRSFSNAGGALNSVVLGSKFLKAAQELLDEAVNVGNDNKVDYSNNKEKMKGNKNVESTSDGGGDDNRSSGGGSGGENSGGDNKQGSELNTAQRQELHMNKSKLVTMLDEVEQRYREYKQQMQIVTSSFEEAAGYGAARAYTALALKTISKQFRCLKDAICLQIKTTGKTLGEDNCMGVKMEGSRLRFIDHNLRQQRALQQLGMIQHNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKDQQHNNNNGSQDDDDDDIDTTTNKKKKKKLIRESSNKELWSSSSSQLEQPPCSSSAIRLDHLNTNQNNTTPMTEISPNSNNNNNSISTSPLNLRNPHHEIMNSPAGSILSVDMEMKPIRETNSNNNNNVNFGIELGNPNKDGYPLMASFGNENHDGGGGSGSGYGSTTFSMDDIGRFHQQLVAPRFHGNGVSLTLGLPPSDNNNTNNNFPSQQVGFLSSHNMHLGGGRIHHHHHEIEAATNDDEFCGMKNNATTPSSHSGTSYDHNNNNIDMQNPKRFASHQLLRDFVA 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01405 758 MobiDBLite consensus disorder prediction 505 559 - -
Arst3g01405 758 Pfam Associated with HOX 203 348 IPR006563 -
Arst3g01405 758 MobiDBLite consensus disorder prediction 225 275 - -
Arst3g01405 758 FunFam BEL1-like homeodomain protein 9 401 463 - -
Arst3g01405 758 Coils Coil 289 316 - -
Arst3g01405 758 MobiDBLite consensus disorder prediction 720 745 - -
Arst3g01405 758 CDD homeodomain 398 459 IPR001356 GO:0003677
Arst3g01405 758 MobiDBLite consensus disorder prediction 244 275 - -
Arst3g01405 758 MobiDBLite consensus disorder prediction 1 26 - -
Arst3g01405 758 Pfam Homeobox KN domain 415 454 IPR008422 GO:0003677|GO:0006355
Arst3g01405 758 ProSiteProfiles 'Homeobox' domain profile. 395 458 IPR001356 GO:0003677
Arst3g01405 758 Gene3D - 394 472 - -
Arst3g01405 758 MobiDBLite consensus disorder prediction 471 559 - -
Arst3g01405 758 SMART HOX_1 398 462 IPR001356 GO:0003677
Arst3g01405 758 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 93 481 - -
Arst3g01405 758 SMART prehox3 198 350 IPR006563 -
Arst3g01405 758 MobiDBLite consensus disorder prediction 720 746 - -
Arst3g01405 758 SUPERFAMILY Homeodomain-like 399 465 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01405 Arst-Chr3 12415548 12423430 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01405 1 758 Homeobox Transcription Factor Family AT2G35940 38.910 1.10e-117 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Arst3g01405 POX 1.6e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01405 - - aip:107629786 877.856