Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01401 ATGGGGTTTTTGTTGAAGGAAGCTTTGAAGACTCTCTGTGCTCGGCACCAGTGGTCTTATGCGGTGTTTTGGAAGATCGGATGTAATAATTCCAAGCTGTTAATCTGGGAAGATTGCTACTACGAACCCTTGCTGTCTCCTTTTCCGGCAAGCGTTGCCGGGGAGGGAAGCTGGTTTTCTTCGGAGTCTCAGTTGTCGCAGCTAGGAATTCAGGATGAGGACAGAGTCTGTTCTTTGATTAACAAAATGATGGTGAATAATTCAGTCAATATAGCTGGTGAAGGGATAATTGGACGGGCAGCATTTACGGGAAACTACCAGTGGATTCTATTGAACAATTTTACAAGAAATGCATATCCACCTGAGGTGTATACTGAGATTCATCACCAATTCTCAGCTGGAATACAGACAATAGTGGTTATTCCTGTGCTTCCGCATGGTGTTGTTCAACTTGGTTCTTTTTTACCGATAATGGAAAATATTGGATTTGTGAATGATGTGAAGAGCTTGATCTTACAATTGGGATGTGTTCCTGGTGCCCTTTTAGCTGATGATTACTCAGCAAAACTTTCTACCATAAGTCTTGCAAAACCTGCTAATGTCGGTATACCTGTGTCTGTTGATCCTCCAGTTATTACCCCAAACTGCCCTCCTTTGATAGCTGGTGGCTCGAACCAAGCAAGTAATTCATCTCATGTTCCAAAGTCTATTGTTCAACACATAAATAATTATGACGGTTCGATAGTGACGCCTCAAAGCCGTAACATAAACCAGATATCATCCAAATACCATAATGAACCTTGTAAACCTAATGACCACTCAATAACCAAAACAAACGTCAGTGGCCAACAAGAGAGTATGGTTGTGAAGGCTGAAGCTGAATTGATGCCATCAAATTTCAGTTCATGTATGCAAAAGCAATCTGGTTCTTATAATACAAGATCTGCATACAATGATTTAGCCAGTTTCCGCCAACCAAGTCTCGGTGATTGCAGCCTTAAATACATGGAACAGCAAATCTTATCTGGAGTTGGGAGACAAAGTCATGTTAGTCCTAATATGAACACATCAAGCACCTTAAATATGGCTCAACTGAAAACAAATAGCAGCCGTATTCTTGGATGTGTCCAGAGTTCTCCAAATTCTTCAGTTCTTGGAGGAGTCCCAACATCTGGTGGGATGACTAATCTTATGAGGACAGATATGATTAACGGGTCGGCTTCAAGCCTACCACAAAATGTTGGGGTTGGACTTCAAAATGATAGATCAACTAGAGCTGGCATGCATTCTGTGTCTAATTTGACCAATCAATCAGTAACCACTCACATGCCTTCAGAAGATTCTAATCAGAAGAATCATGCTGTTGATTTGAAGCGTGCTTATGATGCTCTGGCTTCGTTGGATCAAGGGCTAGATGATGTGATGCTTCAGGACTTTAAAATCCCATTTCTTCATCTTGAGGATCATGTATCCATGAACGATCAGATCTCGGGGTTTGTTGGTGATTGTCTCATTAAGGATGCTACTAGTCAACATATGATGGGAAATGCTAAACATGAAGAAGCTTGCACTCAACCTCCATCGAGTGACGACCTCTTTGATGTTTTAGGTGCAGATTTTAAAATGAAACTGCTGAATGGAAACTGGAATAAGTTGCTTGCTGATGAACCAGATGCCGGTGCTGAAAACTTAGATAACAAGCCAACATACATGAATATGCATGGAGCTCCACATTATAGTAGATCGATAAGCGAAACAATATCAAGCAGTGGTATCATCTCTGCCACCTGCACTGACAACCTCTTAGATGCTGTGATCTCAAGGGCTCAATCTGCTTCTGCCGGGAAACAGAATTCCGATGATATGTCATGCAGGACAACAGTGACAAGGACTAGTACCTCCTCAACTCCCTCTCCGGCCTGTAAACAAGTTCTGTTTGATGTTCCCAAGACGGGGGACAAGATAGGTTCAGCCGAAACCAGTTCTGCTAAGAACACTTCCATTTATGGATCTCAACTTAGTTCCTGGATTGAGAATGGGAGCAGTGTGAAGTGTGAGAACAGCGTTTCGACTGGATACTCTAAGAAGCCAGATGAAGGTAAATCAAACCGTAAAAGGCTCAAGCCTGGGGAGAACCCCCGCCCTCGACCCAAAGATCGCCAAATGATTCAGGATCGTGTGAAAGAGTTACGCGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATTCACTCTTGGAAAGGACTATTAAGCACATGCTTTTCTTGCAAAGTGTAACGAAGCACGCCGACAAGCTGAAACAAACTGGGGAGTCTAAGATTATTAGTAAGGAAGGTGGATTGCTTTTGAGAGATAATTTCGAGGGAGGAGCGACATGGGCGTATGAGGTTGGTTCACAGTCAATGGTTTGCCCTATCATAGTCGAGGATCTGAGTCCTCCGCGTCAGATGCTAGTTGAGATGCTTTGCGAGGAGCGCGGTTTCTTTCTCGAAATAGCTGACTTAATCCGAGGACTAGGCTTAACCATCTTAAAGGGTGTCATGGAAACTCGCAATGACAAGATTTGGGCGCGCTTTGCTGTTGAGGCAAACAGGGATGTAACAAGGATGGAAATATTCATGTCGCTGGTTCGTCTTTTGGAGCAAACAGTGAAGGGAAATGCATCTTCATCGAATGCAGTCGACAACATGATGGCTTATCATTCTTTTCCACAAGCTACCCAGATACCCGCGACCGGTATGCCTACTAGTTTGCAATGA 2760 0.4315 MGFLLKEALKTLCARHQWSYAVFWKIGCNNSKLLIWEDCYYEPLLSPFPASVAGEGSWFSSESQLSQLGIQDEDRVCSLINKMMVNNSVNIAGEGIIGRAAFTGNYQWILLNNFTRNAYPPEVYTEIHHQFSAGIQTIVVIPVLPHGVVQLGSFLPIMENIGFVNDVKSLILQLGCVPGALLADDYSAKLSTISLAKPANVGIPVSVDPPVITPNCPPLIAGGSNQASNSSHVPKSIVQHINNYDGSIVTPQSRNINQISSKYHNEPCKPNDHSITKTNVSGQQESMVVKAEAELMPSNFSSCMQKQSGSYNTRSAYNDLASFRQPSLGDCSLKYMEQQILSGVGRQSHVSPNMNTSSTLNMAQLKTNSSRILGCVQSSPNSSVLGGVPTSGGMTNLMRTDMINGSASSLPQNVGVGLQNDRSTRAGMHSVSNLTNQSVTTHMPSEDSNQKNHAVDLKRAYDALASLDQGLDDVMLQDFKIPFLHLEDHVSMNDQISGFVGDCLIKDATSQHMMGNAKHEEACTQPPSSDDLFDVLGADFKMKLLNGNWNKLLADEPDAGAENLDNKPTYMNMHGAPHYSRSISETISSSGIISATCTDNLLDAVISRAQSASAGKQNSDDMSCRTTVTRTSTSSTPSPACKQVLFDVPKTGDKIGSAETSSAKNTSIYGSQLSSWIENGSSVKCENSVSTGYSKKPDEGKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDSLLERTIKHMLFLQSVTKHADKLKQTGESKIISKEGGLLLRDNFEGGATWAYEVGSQSMVCPIIVEDLSPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMETRNDKIWARFAVEANRDVTRMEIFMSLVRLLEQTVKGNASSSNAVDNMMAYHSFPQATQIPATGMPTSLQ 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01401 919 MobiDBLite consensus disorder prediction 687 722 - -
Arst3g01401 919 MobiDBLite consensus disorder prediction 697 722 - -
Arst3g01401 919 CDD bHLH_AtLHW_like 711 780 - -
Arst3g01401 919 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 707 756 IPR011598 GO:0046983
Arst3g01401 919 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 913 IPR043561 GO:0003700|GO:0006355
Arst3g01401 919 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 170 IPR025610 -
Arst3g01401 919 MobiDBLite consensus disorder prediction 611 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01401 Arst-Chr3 12295056 12301386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01401 529 904 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 56.104 3.00e-117 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01401 - - aip:107629784 1733.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02071 8 29336824 29343041 Arst3g01401 3 12295056 12301386 PCT