Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01399 ATGGTTGGTGTTCATCTTCATCGGATCAAAGCTTGCAACTTTCTCTCCTTCTGCATGGTAATGATGATCACAGTGTGTTACGGTGCTACAGACCCAAATGATCTCAAAATTCTGAATGATTTCAGAAAAGGATTGCAAAATCCCGAGCTTCTCAAATGGCCAGAGAATGGAGTAGGTGACCCATGTGGCAATCCTCCATGGCCTTATGTGTATTGCAATGGTGACAGGGTGACACAGATTCAGTCAAAGAATCTTGGTCTCAAAGGCTCACTCCCTCAGAATTTGAACCAGCTCACAGAACTCCAGAATTTGGGTCTCCAAAGGAACAACCTCAGTGGGGTTTTACCAAGTTTCAATGGATTGTCCAAATTGGAATATGCTTTCTTGGATTACAATGAATTTGACACAATCCCTTTTGATTTCTTCAAAGGACTCACAAACATAAGGATCCTGTCTTTGGAAATGAATCCTTCTTTGAATGCAACCACAGGGTGGTCTTTTCCTTTGGACTTGAAAGAATCATTGCAATTAACCAATCTCTCTTTTGTGCACTGTAATTTGGTTGGACCATTGCCTGAATTTCTAGGCACATTGCCTTCGCTTTTGAATCTGAGGCTCTCATACAACAGAATCTCTGGTGGAATCCCAAACAGTTTTGGCCAATCTTCAATTCAGGTTTTGTGGCTTAACAATCAAGAAGGTGGTGGCATGAGTGGTTCTATTGATGTTATTGCCTCAATGACTTTTCTTACACAGCTTTGGCTTAATGGAAACAAGTTCAATGGAAAAATTCCAAACAACATTGGGAATTTAACTTCCTTGAAGGAGATCAACCTCAATGGAAACCAACTTGTTGGCTTGATTCCGGAATCAATGGCAAACATGGACCTTGATCAAGTTGATTTAAGCAATAACATGTTAATGGGGCCAATACCAAAGTTTAAGGCTGCTACACAAGTATCTTACGGTTCAAATTTCTTTTGTCAGAGTAAGCCTGGGATTCAATGTGCACCTCAAGTTAATGCACTCATTGATTTTCTCCATGATCTGAATTACCCTTCAATTCTGAGTTCTCAATGGTTTGGTAATGATCCTTGTGGAGGGAACTGGATTGGATTGAGCTGCAATCAGAACTCTGAGGTATCTCTTATCAATTTGCCTAGGAGAAATCTTAGTGGTACATTGAGTCCTTCAATTGCTAAGTTGAATTCACTTGTTAAGATTATGCTTGCACAAAATAACATAAGCGGCAAAGTCCCTAGTAATTTTACTCAATTGAAATCACTGAGTTTGTTGGATTTGAGTTATAACAATTTTGAGCCTCCATTGCCAAAGTTCAATGATGGTATGAAGGTTGTTATTGATGGAAACCCTCTTTTTGCTGATCAACATGGAAAGAGTCCCTCATCTATTAGTAGTCCACAACCTTCACCCCCGAATCCGGCATCACCACGGCCTCTGCTCTCTCTGCCACCAAAACCAAAACCAAAACCAACACCCTCGGATATGCCGCCTTCCCCTGCTCCAGTTCAAAGATCAAATGGCTCGAAAAGATCAAAATTGGTAGTATTACTTGTTGGTGTTGGAATCTTTACATTTGTGGCTGTTTTGCTTGTTTCTCTATTTGTATGTTGTTTGAAGAAGAAAAAGGCTCCTAGCAGTCTTAATCCTCACACTCATGATACATATAACCCAGAAACAATGTTGAAATTCGCTGTTTCGAGCTGTGATGCTGATACCAAGTCAACAAAGACAAGGTTAAGTTCTGTGAGTAACCTGAGTGGTGAAACAGAAAACACTCATATGAGTGATTCTCGAAACCTTGTCATATCAGTACAAGTTCTACGCGAGGTGACGAAGGATTTCGCAGCGGAAAATGAGCTAGGGCGAGGGGGGTTTGGAACCGTTTACAAGGGAGAGCTAGGAGATGGAACGAAGATAGCAGTGAAGAGAATGGAGAATGGAGCTATTAGGAGCAAGGGAGTGGACGAATTCCAGGCGGAAATAGGGGTTCTTTCGAAGGTGCGGCACCGGCATTTGGTGTCGCTTCTAGGGCACGCAATAGAAGGAAATGAAAAACTATTGGTTTATGAGTATATGCCTTTAGGTGCTCTAAGCAAGCATCTATTTGAATGGGAGAGATTGAAATTGGAGCCTCTGTGTTGGTCTCAGAGGCTTGTGATAGCACTTGATGTTGCAAGAGGAATGGAGTACCTTCATGGTTTTGCTCGCCATACCTTCATCCATCGTGATCTCAAGTCTTCCAACATTCTACTTGCTCATGATTTTCGGGCAAAGGTTTCTGATTTTGGTCTTGTCAAACTTGCCCCCGATGGGAACAAGTCTGTGGCTACCAAGCTTGCCGGAACCTTCGGATACCTCGCCCCTGAGTACGCAGTGATGGGTAAAATCACGACGAAAGTGGACGTGTTCAGTTACGGTGTGGTGTTAATGGAACTTCTAACCGGACTAATGGCTCTGGACGAGAACCGGCCAGAGGAGAACCGGTACTTAGTGGAATGGTTCTGGCAAATCAAATCAAGCAAGGAAAAGCTTCTTGCCGCCATAGATCCTGCTCTCAAAGCCACCCAAGACATTTTCGACAGCATCTACATTGTGGCGGAGCTGGCCGGACACTGCACCGCCAGGGAAGCAAACCACCGGCCGGACATGAGCCATGCAGTCAACGTGCTGTCGGCATTGGTGGAGAAATGGCAACCGGTTGACGAAGAAGTCAACGGTGGGTCGGGCGACATTGACTACGGTCAACCGCTTTCGCAGATGTTGAAGGTTTGGAAGGAAGCGGAAGGGAAAGAATTGGGTTACACTAGTCTTGAAGATAGTAAGGGAAGTATTCCAGCTAAGCCTACTGGTTTTGCTGACTCATTCACTTCTGCTGATGCTAGATGA 2910 0.4361 MVGVHLHRIKACNFLSFCMVMMITVCYGATDPNDLKILNDFRKGLQNPELLKWPENGVGDPCGNPPWPYVYCNGDRVTQIQSKNLGLKGSLPQNLNQLTELQNLGLQRNNLSGVLPSFNGLSKLEYAFLDYNEFDTIPFDFFKGLTNIRILSLEMNPSLNATTGWSFPLDLKESLQLTNLSFVHCNLVGPLPEFLGTLPSLLNLRLSYNRISGGIPNSFGQSSIQVLWLNNQEGGGMSGSIDVIASMTFLTQLWLNGNKFNGKIPNNIGNLTSLKEINLNGNQLVGLIPESMANMDLDQVDLSNNMLMGPIPKFKAATQVSYGSNFFCQSKPGIQCAPQVNALIDFLHDLNYPSILSSQWFGNDPCGGNWIGLSCNQNSEVSLINLPRRNLSGTLSPSIAKLNSLVKIMLAQNNISGKVPSNFTQLKSLSLLDLSYNNFEPPLPKFNDGMKVVIDGNPLFADQHGKSPSSISSPQPSPPNPASPRPLLSLPPKPKPKPTPSDMPPSPAPVQRSNGSKRSKLVVLLVGVGIFTFVAVLLVSLFVCCLKKKKAPSSLNPHTHDTYNPETMLKFAVSSCDADTKSTKTRLSSVSNLSGETENTHMSDSRNLVISVQVLREVTKDFAAENELGRGGFGTVYKGELGDGTKIAVKRMENGAIRSKGVDEFQAEIGVLSKVRHRHLVSLLGHAIEGNEKLLVYEYMPLGALSKHLFEWERLKLEPLCWSQRLVIALDVARGMEYLHGFARHTFIHRDLKSSNILLAHDFRAKVSDFGLVKLAPDGNKSVATKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLMALDENRPEENRYLVEWFWQIKSSKEKLLAAIDPALKATQDIFDSIYIVAELAGHCTAREANHRPDMSHAVNVLSALVEKWQPVDEEVNGGSGDIDYGQPLSQMLKVWKEAEGKELGYTSLEDSKGSIPAKPTGFADSFTSADAR 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01399 969 SMART serkin_6 622 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01399 969 FunFam receptor protein kinase TMK1 584 699 - -
Arst3g01399 969 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Arst3g01399 969 Pfam Leucine rich repeat N-terminal domain 338 376 IPR013210 -
Arst3g01399 969 MobiDBLite consensus disorder prediction 946 969 - -
Arst3g01399 969 Gene3D Ribonuclease Inhibitor 338 463 IPR032675 -
Arst3g01399 969 ProSiteProfiles Protein kinase domain profile. 622 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01399 969 CDD STKc_IRAK 628 898 - -
Arst3g01399 969 FunFam PTI1-like tyrosine-protein kinase 3 700 912 - -
Arst3g01399 969 SUPERFAMILY L domain-like 338 446 - -
Arst3g01399 969 SMART LRR_typ_2 98 120 IPR003591 -
Arst3g01399 969 SMART LRR_typ_2 198 221 IPR003591 -
Arst3g01399 969 SMART LRR_typ_2 271 294 IPR003591 -
Arst3g01399 969 SMART LRR_typ_2 121 144 IPR003591 -
Arst3g01399 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 747 759 IPR008271 GO:0004672|GO:0006468
Arst3g01399 969 FunFam Receptor-like kinase TMK4 32 333 - -
Arst3g01399 969 FunFam Leucine-rich repeat receptor-like kinase 338 463 - -
Arst3g01399 969 Gene3D Ribonuclease Inhibitor 32 333 IPR032675 -
Arst3g01399 969 SUPERFAMILY L domain-like 30 316 - -
Arst3g01399 969 PANTHER OSJNBA0070M12.3 PROTEIN 17 969 - -
Arst3g01399 969 PANTHER OSJNBA0070M12.3 PROTEIN 17 969 - -
Arst3g01399 969 ProSitePatterns Protein kinases ATP-binding region signature. 628 650 IPR017441 GO:0005524
Arst3g01399 969 SUPERFAMILY Protein kinase-like (PK-like) 602 898 IPR011009 -
Arst3g01399 969 MobiDBLite consensus disorder prediction 463 515 - -
Arst3g01399 969 Gene3D Phosphorylase Kinase; domain 1 582 699 - -
Arst3g01399 969 MobiDBLite consensus disorder prediction 472 507 - -
Arst3g01399 969 Gene3D Transferase(Phosphotransferase) domain 1 700 915 - -
Arst3g01399 969 Pfam Protein tyrosine and serine/threonine kinase 625 896 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01399 Arst-Chr3 12203501 12206828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01399 89 903 Receptor kinase-like Gene Family AT5G07280 31.649 2.99e-78 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Arst3g01399 PK_Tyr_Ser-Thr 8.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01399 K00924 - gmx:100815045 1290.4