Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01362 ATGCAGCCCAGTAGTAGTGGCAGTGGCGGTGGTGGTAGCAGCGGTGGTGTTGCCAGGTTCCGTTCAACTCCAGCGAGCTGGTTAGAATCAATTTTTGTCAAGGAAGAAGTGGAAGGAGAAGGAGAAGAAGAAGCTGATCCTCCGGCGTTGAATAGCAGCAGCAGCAGCATCCACCAGCAGGGATTCACTCAGCTTCTTTCCGGTGACACAAGCGGGGTTTTCCGCCACAATAGTTCTCCCGCCGATTTTGTATTCGACTACTCTCAACAATACGTATCCTCCAACTACGACTACGACTACGCCTACGCTTCTCCGGATAACAGCAGCGCGAATAATCCAATCCCGCAGGAAATTAAGCAGAGAGGGGTGAAAGTGGAGAATAAGATTATGAAGGATTCTGTGCCTTGGAAAGTTCGAGCAAAGCGTGGCTGTGCTACTCATCCTAGGAGTATTGCTGAAAGGGTTAGGAGGACTCGTATCAGTGATCGTATCAGGAAGCTGCAGGAACTTGTGCCAAACATGGATAAGCAAACTAATACTGCAGACATGTTAGATGAGGCAGTAGCTTATGTCAAGTCTCTCCAAAAGCAAATTGAGGAACTATCGGAGCAGCAACGGAGATGTAATTGTGTGGTTCAAAGGAGTAGGGAGATGTAA 657 0.484 MQPSSSGSGGGGSSGGVARFRSTPASWLESIFVKEEVEGEGEEEADPPALNSSSSSIHQQGFTQLLSGDTSGVFRHNSSPADFVFDYSQQYVSSNYDYDYAYASPDNSSANNPIPQEIKQRGVKVENKIMKDSVPWKVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKSLQKQIEELSEQQRRCNCVVQRSREM 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01362 218 MobiDBLite consensus disorder prediction 33 59 - -
Arst3g01362 218 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 194 IPR011598 GO:0046983
Arst3g01362 218 MobiDBLite consensus disorder prediction 1 20 - -
Arst3g01362 218 Pfam Helix-loop-helix DNA-binding domain 149 195 IPR011598 GO:0046983
Arst3g01362 218 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 147 212 IPR036638 GO:0046983
Arst3g01362 218 Coils Coil 184 211 - -
Arst3g01362 218 Gene3D - 145 217 IPR036638 GO:0046983
Arst3g01362 218 FunFam Transcription factor bHLH130 family 145 214 - -
Arst3g01362 218 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 54 208 - -
Arst3g01362 218 SMART finulus 150 200 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01362 Arst-Chr3 11701744 11705036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01362 72 211 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 50.898 5.18e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst3g01362 HLH 7.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01362 - - adu:107477635 379.793