Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01319 ATGGAATATGCAATGATTCGTTCTTCTAACTCCAAGTGTGTTGCGACAATCCTTCTGGTAATTGTTTTAACCATCACAAATTGTGGTGAAGCGAAAGGGAGAGAATTCCGACAATCAAACACAGTATTCATTAGAAGCTCATGTAGCTCCACAACATACCCAAAACTATGCTACACTTCGCTGGTGAAGCATGCGGCATTCATTCAAACAAACCCTGTTCTTCTAACATGTCCACGATGGCGAGGAGCGGTGGCCTGAGCGGGAGAGACGCGGCGGCTATGCAGGACTGCATGGAGGTGCTGGCTGATTCCGTGGAGGAGCTCACAAAATCGATTGGAGAAATGAGTCATTTGAGGACAAGTAATTTTGAAGGAACAATGAGTGATGTTCAAACTTGGGTCAGCGCTGCTTTGACCGATGATACCACCTGCACTGATGGCTTCCAACAGACCCCTAGTTCTGTCGCCGAAGATGTTAAGACCGCCGTCCGTGGCCGCGTCGTCGAGGTGGCGCAACTCACTAGTAATGCCTTGGCTTTGATCAATCAGCTCGCTAATGGCCATCCTTAA 569 0.4833 MEYAMIRSSNSKCVATILLVIVLTITNCGEAKGREFRQSNTVFIRSSCSSTTYPKLCYTSLVKHAAFIQTNPVLLTGTALNITLSSAKSTSAAMSTMARSGGLSGRDAAAMQDCMEVLADSVEELTKSIGEMSHLRTSNFEGTMSDVQTWVSAALTDDTTCTDGFQQTPSSVAEDVKTAVRGRVVEVAQLTSNALALINQLANGHP 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01319 206 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 201 IPR035513 -
Arst3g01319 206 Pfam Plant invertase/pectin methylesterase inhibitor 43 197 IPR006501 GO:0004857
Arst3g01319 206 NCBIfam pectinesterase inhibitor domain 16 201 IPR006501 GO:0004857
Arst3g01319 206 PANTHER PECTINESTERASE INHIBITOR-LIKE 17 197 - -
Arst3g01319 206 FunFam Pectinesterase inhibitor 3 39 202 - -
Arst3g01319 206 CDD PMEI-like_3 46 203 - -
Arst3g01319 206 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 203 IPR035513 -
Arst3g01319 206 SMART PMEI_2 39 197 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01319 Arst-Chr3 11119483 11120400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01319 14 203 Carbohydrate Esterase AT3G05610 26.633 3.44e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01319 - - gmx:100305537 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01319 3 11119483 11120400 Arst3g01319 3 11119483 11120400 ECH