Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01292 ATGAAGACACCTTTCTTCTTTTCCTTCTCCCTCTTCTTCTTCTTCTTCTACTGCCACACCCTACTTGTCTTCTCTGCTACCACCTTACCCCTCCAACTCATCTCTCTACTCTCAATAAAATCATCCCTCATAGACCCTAACAACATCCTCCATGATTGGGACCCTTCTTCATCCTTCTCCTCCAACACCGAAAACCAAGACCACCCTATATGGTGTTCATGGACAGGCATCATTTGCCACTCAAAAACATCACAAATCACCACCTTGGACCTCTCAAACCACAACTTCTCAGGCACAATCTCACCCCAAATCAGGTACCTAACTACCCTCAACCACTTGAACCTAAGTCGGAATGTCTTCAGTGGAACCTTCCAAGCTGCAATCTTTGACCTCAGCGAACTCAGGACTTTGGATATCAGTCACAACTCCTTCAACTCAACGTTCCCACCGGGGATATCTAAGCTCAAGTTCTTGAGAGTCTTAAATGCTTACAGCAACAACTTCATTGGACCTCTCCCACAAGAACTCTCCATGCTTCGCTTCCTTGAACACCTCAACCTTGGAGGAAGCTACTTCAATGGCACAATCCCACCAAGTTATGGCTCCTTGGCCAGACTCAACTTCTTATACCTCGCCGGGAACTCATTGGTAGGTCCAATTCCACCGCAATTAGGCTACCTCAGACAGCTACAACACATGGAAATTGGTTACAATCCATTGGAATCACCATTACCAACAGAGTTAGCAATGTTAACAAATCTCAGCTACTTGGACATCTCAAGTACTAACATCACAGGTCCTCTGATTCCAGAACTTGTTGGGAACTTAACAATGCTGGAGACACTGTTGCTGTTCAAGAATAAGTTAACGGGTGAAATCCCAAGAAGCATAGGGAACTTGAAGTTACTGAAAGCTCTTGATTTGTCAGATAACAAGCTCACGGGTTCAATTCCGGAAGAAATCTCAATGCTGAAGGAACTCAACTTCTTGGGCTTGGAACTGAACAATCTAACAGGGTCAATTCCACAAACAGTTGGTGACCTTCCAAACTTGAACTTCCTCCTTCTCTTCAACAACTCACTCACCGGAATTCTTCCTCAGAAGCTCGGCTCCAACGGTTTGTTACAGAAAGTGGATGTTTCAACCAACTTTCTAGAAGGTCCCATTCCTCCAAACCTCTGCAACGGCAACAACCTCAACAGGCTCATCCTCTTCTATAACCGTTTTAACGACTCGCTTCCGAGTTCACTTGTTAACTGTATCTCCCTCTCCAGGGTTCGCATTCAGAATAACCGCTTCAACGGTCAAATTCCGTTAGGTCTTGGTCAACTCCCTAACCTGACGTTCCTTGACATCAGCGACAACGAATTCACCGGGAGAATTCCCGAGGATTTCGGCAATGCCGTAAGGCTTCAGTTCTTGAACATCTCCGGCAACGCGTTTGAGAGCGCGTTGCCGAGCAACATATGGAACTCCACCAGCCTCCAGATCTTCTCCGCTGCGGGTTCCAAGATCACCGGTGAGATTCCCGACTTCGTAGGGTGCAAGAACATATACAGGATCGAGTTGCAGGGGAATTCACTCAACGGAAGCATTCCATGGGATATTGAAAACTGTGAGAAGCTGATTCAGCTGAATCTGAGTAGAAACTCACTCACCGGAATCATTCCATGGGAAATCTCAGCGCTGCCTTCGATCACCTACGTGGATCTCTCGCACAACTCGCTCACCGGAACTATTCCTTCGAACTTCAACAACTGCACCACGCTAGAGAACTTCGACGTCAGTTTCAACTCCCTCACCGGACCTATACCTTCGTCGGGGATCTTCCCGAACCTCCACCAGTCGGAATTCTCCGGCAACCCCGGCCTATGCGGCGGCATGGTCGCGAAGCCATGCGCGGCTGAGACGCTAGGCTCGGAGGACAACCAGGTCGACGGTCGACGACAGCAGCCGAGGAAAACTGCCGGAGCGATCGTGTGGATCGTTGCAGCGGCGTTTGGGATCGGAGTTTTCGTCCTCGTAGCGGGGACACGGTGCTTCCACGCGAATTACGGCCGCCGTTTCGGTAACGACGGACAGGAGATGGGACCGTGGAAGTTAACGGCGTTTCAACGACTGAATTTCACGGCGGAGGATGTGTTAGAGTGTTTGTCGATGTCTGATAAGATCTTAGGGATGGGGTCCACTGGAACGGTTTACAGAGCGGAAATGCCAGGTGGCGACATCATAGCGGTTAAGAAGCTGTGGGGAAAGCAAAAGGAGAATATCCGACGGAGGAGAGGGGTGCTTGCTGAGGTGGAGGTGTTGGGGAACGTGAGGCACAGGAATATAGTGAGGTTGTTAGGGTGCTGCAGCAACAGAGAGTGCACCATGCTGCTTTACGAGTACATGCCCAATGGGAACTTAGATGACTTGTTGCATGGCAAGAACAAGGGTGATAATCTCGTTTCTGATTGGTTCACTAGGTACAAGATTGCCCTTGGTGTGGCGCAGGGGATTTGCTACCTTCACCATGATTGTGATCCTGTTATCGTGCATCGCGATCTAAAACCTAGTAATATATTGCTAGATGCTGACTTGGAGGCCAGGGTGGCGGATTTTGGGGTGGCTAAATTGATCCAGACCGATGAATCCATGTCTGTCATCGCTGGATCATACGGCTACATTGCCCCCGAATACGCCTATACTCTTCAAGTGGATGAAAAGAGTGACATCTACAGCTATGGGGTGGTGTTAATGGAGATCTTAAGTGGAAAACGTTCAGTGGATGCAGAATTTGGAGATGGGAATAGCATTGTCGATTGGGTGAAGTCAAAGATAAAGAGCAAAGATGGGGTTGATGATATATTAGATAAGAATGCAGGTTCAGGGTGTTCCTCAGTGAGGGAAGAGATGATACAAATGCTTAGAATTTCATTGCTTTGCACAAGCAGGAACCCAGCTGATAGGCCTTCAATGAGGGATGTAGTGTTGATGCTTCAAGAAGCCAAGCCCAAAAGGAAGTTGCTGGATCTGGATAGTATTGTTATAGGTCGATGTGGCGGCGGCGGCGGGGACAATGTGGTGGTTGGTGGTGGTGAAATTCCTTTGGCACAAAAGGCCACGGCGGAAAGCTAA 3120 0.4853 MKTPFFFSFSLFFFFFYCHTLLVFSATTLPLQLISLLSIKSSLIDPNNILHDWDPSSSFSSNTENQDHPIWCSWTGIICHSKTSQITTLDLSNHNFSGTISPQIRYLTTLNHLNLSRNVFSGTFQAAIFDLSELRTLDISHNSFNSTFPPGISKLKFLRVLNAYSNNFIGPLPQELSMLRFLEHLNLGGSYFNGTIPPSYGSLARLNFLYLAGNSLVGPIPPQLGYLRQLQHMEIGYNPLESPLPTELAMLTNLSYLDISSTNITGPLIPELVGNLTMLETLLLFKNKLTGEIPRSIGNLKLLKALDLSDNKLTGSIPEEISMLKELNFLGLELNNLTGSIPQTVGDLPNLNFLLLFNNSLTGILPQKLGSNGLLQKVDVSTNFLEGPIPPNLCNGNNLNRLILFYNRFNDSLPSSLVNCISLSRVRIQNNRFNGQIPLGLGQLPNLTFLDISDNEFTGRIPEDFGNAVRLQFLNISGNAFESALPSNIWNSTSLQIFSAAGSKITGEIPDFVGCKNIYRIELQGNSLNGSIPWDIENCEKLIQLNLSRNSLTGIIPWEISALPSITYVDLSHNSLTGTIPSNFNNCTTLENFDVSFNSLTGPIPSSGIFPNLHQSEFSGNPGLCGGMVAKPCAAETLGSEDNQVDGRRQQPRKTAGAIVWIVAAAFGIGVFVLVAGTRCFHANYGRRFGNDGQEMGPWKLTAFQRLNFTAEDVLECLSMSDKILGMGSTGTVYRAEMPGGDIIAVKKLWGKQKENIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHGKNKGDNLVSDWFTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDADLEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDAEFGDGNSIVDWVKSKIKSKDGVDDILDKNAGSGCSSVREEMIQMLRISLLCTSRNPADRPSMRDVVLMLQEAKPKRKLLDLDSIVIGRCGGGGGDNVVVGGGEIPLAQKATAES 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01292 1039 Pfam Leucine rich repeat 517 576 IPR001611 GO:0005515
Arst3g01292 1039 Pfam Leucine rich repeat 85 143 IPR001611 GO:0005515
Arst3g01292 1039 Pfam Leucine Rich Repeat 446 467 IPR001611 GO:0005515
Arst3g01292 1039 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 688 797 - -
Arst3g01292 1039 FunFam Leucine-rich repeat receptor-like protein kinase TDR 325 635 - -
Arst3g01292 1039 ProSiteProfiles Protein kinase domain profile. 719 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01292 1039 ProSiteProfiles Leucine-rich repeat profile. 302 324 IPR001611 GO:0005515
Arst3g01292 1039 Gene3D Phosphorylase Kinase; domain 1 698 797 - -
Arst3g01292 1039 PRINTS Leucine-rich repeat signature 563 576 - -
Arst3g01292 1039 PRINTS Leucine-rich repeat signature 303 316 - -
Arst3g01292 1039 SUPERFAMILY L domain-like 57 383 - -
Arst3g01292 1039 Gene3D Transferase(Phosphotransferase) domain 1 798 1008 - -
Arst3g01292 1039 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Arst3g01292 1039 Gene3D Ribonuclease Inhibitor 351 636 IPR032675 -
Arst3g01292 1039 SUPERFAMILY RNI-like 291 624 - -
Arst3g01292 1039 FunFam leucine-rich repeat receptor-like protein kinase TDR 798 1005 - -
Arst3g01292 1039 Gene3D Ribonuclease Inhibitor 213 350 IPR032675 -
Arst3g01292 1039 FunFam Leucine-rich repeat receptor-like protein kinase 32 198 - -
Arst3g01292 1039 Pfam Protein kinase domain 722 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01292 1039 ProSitePatterns Protein kinases ATP-binding region signature. 725 748 IPR017441 GO:0005524
Arst3g01292 1039 SUPERFAMILY Protein kinase-like (PK-like) 722 994 IPR011009 -
Arst3g01292 1039 Gene3D Ribonuclease Inhibitor 33 198 IPR032675 -
Arst3g01292 1039 SMART serkin_6 719 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01292 1039 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 221 317 - -
Arst3g01292 1039 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 203 996 - -
Arst3g01292 1039 SMART LRR_typ_2 203 227 IPR003591 -
Arst3g01292 1039 SMART LRR_typ_2 469 492 IPR003591 -
Arst3g01292 1039 SMART LRR_typ_2 300 324 IPR003591 -
Arst3g01292 1039 SMART LRR_typ_2 131 155 IPR003591 -
Arst3g01292 1039 SMART LRR_typ_2 348 371 IPR003591 -
Arst3g01292 1039 SMART LRR_typ_2 444 467 IPR003591 -
Arst3g01292 1039 SMART LRR_typ_2 563 586 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01292 Arst-Chr3 10789535 10794191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01292 11 1002 Receptor kinase-like Gene Family AT1G08590 42.717 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst3g01292 Pkinase 4.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01292 - - gmx:100809695 1577.76