Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01278 ATGGTGGTCGATGTGGCAAGTGCTTTGCTCTCTGCCTCCCTGCAAGTCTTGATTGACAGGTTAGCTTCTCCTCAGCTTCTGTTCTTCTTTCGCAACAAGACCTACGAAGCTGCCGAGGATTTGAAGCTGCAGTTACTCTCAGTGAACTCTGTCCTCGTGGATGCAGAGGAGAAGCAGATCGTCAACCCATACGTCAAGATATGGCTCAACGAGCTTCGAGAAGCTCTCTACTCTGCCGAAGATCTTCTTGATAAGCTTGACACTCAGGTTTTGGAATACAAGGTGAGGTCTCAGTCACACACCACATTGGACACTGTAATAGACTACTTTGATTCTGTTTCTCCTTTGGCTAAGTCGTTGAATCGTAGCCTTGAGAAAATAAATCTCAGGCTTCATGTTTTGAGAGACTATCAAAACTGTTTGGGCCTTAGGGAAGTCCCACAGAATCTGTTCCCACTGCTACCTAATGTGCCTACTACTAGAAGGGTGGATTGGGCTAGGGTTTATGGCAGGGACAGTGTAAAAGAAACAATCATACAAGGTATGCTTGGAACCATGAATGAGGAAGTTGAACCAATTGTTGTGGCAATTGTTGGGATGGCAGGGGTTGGCAAAACTACTCTGTCTCAGGTTTTGTTCAGCGATGAACATGTAACGCGAAACTTCCATATACGGTCTTGGGTTTATGTCTCTGAGGGTTCTGATGTTCTCTACTTAACCACCAAGGTTTATGAGTCATTGACGGGTTCTAGTGTTGGGAGTACAAGCTTGGACAGACTTCAAGACCAAGTAGCATCTTTGTTGAGTGGAAAGAACTTCTTGTTGGTTTTAGATGATTTTTGGGCTGAGAGTTTCTTTGACTGGGAACTCTTCAAGATGGCCTTTATGGATGCTGCTATTAGATGTGTTATTCTAGTCACCACCCGCAATGAAAATGTGGCAATCACTATGCGTGCTGCTGTTTATTTCCTTTCACATCTACCGGATGATGATTGTTGGAACATCTTTGCTCATTATGCATTTGGGAACAGAAATCCGGAGCCAACTTTGTTGGAGATTGGTCACAGGATAGTGAGAAAGTGCAAGGGTCTTCCTTTAGCTGCAAAAGTGCTTGGGAGTGTTTTACATTCAGTGACAGAAGCTGAAGAATGGAATAACATACTGCAAAGTAAGATGTGGGATTTGCCGGCTAATAAGAGCAACATCTTGGCTGCATTAAGATTAAGCTATCAACTTCTTCCTTCACATTTGAAGGCCTGCTTTGCCTACTGCTCCATATTTCCCAAGGGATATGAAATTAAGAAGTTGAACTTGATCCATTTATGGATGGCTGAGGGTCTTCTACAACCATCAAAGGCTAAAACAATGCAGAGGGTAGGTGAGGAATACCTGTGTGAGCTTTTGTCGAGGTCATTGCTACAACGATCAACAAGTAATGATTCGTTCATTATCATGCATGACCTCATAAGCGACTTAGCACAATATGTTGGGGGCGAATTTTTTCATCTTTTTGAGGATGATAATGCTGGACGAATTTCGGAGAAAGTTCGCCATCTCTCCTTCTTGCAAGATAAGCTTGATGCACCAGACAAATTTGATGCTTTCTATGATCATTCACAGTTGAGAACCTTCATACCATTTAAGCTCTCAAACTCAAGGCAGTTTGGTTTATCAGCTGATGTAGTTTTCGGTAGCTTGATACCAAGATTCGTTTGTGCTCGGGTGCTTTCTTTGTCAGGTTACTCACTCATTACACTGCCTGATACAATTGGAAACTTGAAGCACTTGCGTTATTTGAATCTTTCTCACACAAATATTCAGCAATTACCGAAATCCATAGGGCTTTTGTACAATCTGCAAATATTGTTGCTTTCAAATTGTGTTCATCTCACTAGTTTGCCTGAAAGTCTGGTGAATTTGATTTACTTGCACCATCTTGATATCATCGGTGTCCCTTTGACAGAGATGCCCCCGCAATTTGGCAAATTGAAGCTTCTTCAAAATCTTGCTGTCTTTGTTGTCAACAGAAACACAGGATCAAGCATTAGCGAGTTAGGGGCTCTATTGCAACTTCATGGTTCACTTTCTATTGTGAACTTGCAGAACATTGCTGATGCCACAGATGCATTCAGAGCCAACTTGATGGGTAAGAAATTTCTTGATGAGTTAGTATTGAAATGGACAAATACTATCCATGACTTACACATTGAAGCAGCTGTTCTTGAAAATCTTCAGCCACATGGAAACTTGAAAAGGCTGAATATTGAAAACTATGGTGGCCGAGCATTTCCAGGTTGGTTGGGAAATCCTTTGTTCTCTAACATGGTGTCTATAAATCTAACTGGTTGCATCAACTGCTCGAATTTGCCACCACTTGGGCAATTATCCTCTCTCAAGACTCTACTCATAGCAAACATGAGAAGCCTAAGAAGAGTTGGTCCTGAGTTCTATGGAAATATAGATTCACCTTTTAGAGCCCTTGAAATGTTGATTTTTGAGGACATGCTTATATGGGGAGAGTGGTTGCCAACTGAGTTTGAAGAATTCCCTTCCCTTAAAGAGCTTCACATAAAGAGATGTCCATTATTGACCGGGAACTTGTCCCGCCATTTGGGTTCTCTAGAAAAACTTGTCATCTCTGGATGCCATAATCTTGCCAATTCATTTCCAAGAGTCCCAAGATTGAGAGAACTAGAGCTAACTGATTGCGATGCATTGATGATCTTGCCGGAGGAAATGATGCTAGGGACTGGAGCTCTAAGAAGGGTGACCATATGCGACTGTCCCTTGCTTCAATCTTTTCCTGCACTTGGTCTTCTTACACGGTTAAAGTCACTTCACATATGCAACTCTAGGAATTTAGAGTTTCTTCCACTGCAACAAGCTCCACACAATTACCAAGCAATGGAGCAGTTGCACTTGGAAGGCAGCTGCGACGATCTGGTTTTTTTCCCACTGTCTTCCTTCCCGGCTCTCCGTGATCTTCACATCCAAGACTGTCTCAATCTCCAATCTCTTCAGAGGCTGGCAGACTGGGAACTGCCCTCTCTTGAAAGCATATTGATAAAAGATTGCCCAAACTTGATGTCTTTCCCGGAAGGAGGGTTACCACCTACTCCTATCCTTCGATGCATTTCAATTAGCAACTGTCCAAACCTGTCACCCCAAGCAGAATGGGGTCTTCATGAATTGACATGTCTTGAATTGTTCAGGATTGAAGGGGAACTGATTGGTTTAGAGTCATTTCCAGATGAAGGGGTGCTTCCAGCTTGCTTGAATTCTCTTCACATCACTGGACTTGTGAACCTCACAACTCTCAATCATAGTGGTCTTCAGCACCTTGAATCCCTCAAACTTCTGCAGATTAGTGGTTGTAACATGCTACAATCTCTACCTGCAGAGGGTCTTCCAAATTCCTTGTGTTCTCTCATCATCATGGATTGTCCTCTGCTTGCTCCTCTGTGTGAAGAGGAGACGGGAGAGCATTGGCCTCTCATTTCTCACATCCCAAACATAGTTATTTACTGA 3528 0.4286 MVVDVASALLSASLQVLIDRLASPQLLFFFRNKTYEAAEDLKLQLLSVNSVLVDAEEKQIVNPYVKIWLNELREALYSAEDLLDKLDTQVLEYKVRSQSHTTLDTVIDYFDSVSPLAKSLNRSLEKINLRLHVLRDYQNCLGLREVPQNLFPLLPNVPTTRRVDWARVYGRDSVKETIIQGMLGTMNEEVEPIVVAIVGMAGVGKTTLSQVLFSDEHVTRNFHIRSWVYVSEGSDVLYLTTKVYESLTGSSVGSTSLDRLQDQVASLLSGKNFLLVLDDFWAESFFDWELFKMAFMDAAIRCVILVTTRNENVAITMRAAVYFLSHLPDDDCWNIFAHYAFGNRNPEPTLLEIGHRIVRKCKGLPLAAKVLGSVLHSVTEAEEWNNILQSKMWDLPANKSNILAALRLSYQLLPSHLKACFAYCSIFPKGYEIKKLNLIHLWMAEGLLQPSKAKTMQRVGEEYLCELLSRSLLQRSTSNDSFIIMHDLISDLAQYVGGEFFHLFEDDNAGRISEKVRHLSFLQDKLDAPDKFDAFYDHSQLRTFIPFKLSNSRQFGLSADVVFGSLIPRFVCARVLSLSGYSLITLPDTIGNLKHLRYLNLSHTNIQQLPKSIGLLYNLQILLLSNCVHLTSLPESLVNLIYLHHLDIIGVPLTEMPPQFGKLKLLQNLAVFVVNRNTGSSISELGALLQLHGSLSIVNLQNIADATDAFRANLMGKKFLDELVLKWTNTIHDLHIEAAVLENLQPHGNLKRLNIENYGGRAFPGWLGNPLFSNMVSINLTGCINCSNLPPLGQLSSLKTLLIANMRSLRRVGPEFYGNIDSPFRALEMLIFEDMLIWGEWLPTEFEEFPSLKELHIKRCPLLTGNLSRHLGSLEKLVISGCHNLANSFPRVPRLRELELTDCDALMILPEEMMLGTGALRRVTICDCPLLQSFPALGLLTRLKSLHICNSRNLEFLPLQQAPHNYQAMEQLHLEGSCDDLVFFPLSSFPALRDLHIQDCLNLQSLQRLADWELPSLESILIKDCPNLMSFPEGGLPPTPILRCISISNCPNLSPQAEWGLHELTCLELFRIEGELIGLESFPDEGVLPACLNSLHITGLVNLTTLNHSGLQHLESLKLLQISGCNMLQSLPAEGLPNSLCSLIIMDCPLLAPLCEEETGEHWPLISHIPNIVIY 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01278 1175 Coils Coil 69 89 - -
Arst3g01278 1175 Gene3D - 29 127 - -
Arst3g01278 1175 Pfam NB-ARC domain 183 410 IPR002182 GO:0043531
Arst3g01278 1175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 424 IPR027417 -
Arst3g01278 1175 Gene3D - 409 495 IPR036388 -
Arst3g01278 1175 SUPERFAMILY L domain-like 485 885 - -
Arst3g01278 1175 Gene3D - 156 324 IPR027417 -
Arst3g01278 1175 PRINTS Disease resistance protein signature 267 281 - -
Arst3g01278 1175 PRINTS Disease resistance protein signature 194 209 - -
Arst3g01278 1175 PRINTS Disease resistance protein signature 361 375 - -
Arst3g01278 1175 PRINTS Disease resistance protein signature 869 885 - -
Arst3g01278 1175 ProSiteProfiles Leucine-rich repeat profile. 595 616 IPR001611 GO:0005515
Arst3g01278 1175 SUPERFAMILY RNI-like 841 1073 - -
Arst3g01278 1175 PANTHER DISEASE RESISTANCE PROTEIN RP 40 903 IPR044974 GO:0006952
Arst3g01278 1175 Gene3D Ribonuclease Inhibitor 1037 1172 IPR032675 -
Arst3g01278 1175 Gene3D Ribonuclease Inhibitor 933 1036 IPR032675 -
Arst3g01278 1175 Gene3D - 326 408 IPR042197 -
Arst3g01278 1175 Pfam Rx N-terminal domain 10 99 IPR041118 -
Arst3g01278 1175 FunFam Probable disease resistance protein At1g63360 410 495 - -
Arst3g01278 1175 Coils Coil 38 58 - -
Arst3g01278 1175 Gene3D Ribonuclease Inhibitor 549 930 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01278 Arst-Chr3 10577339 10581316 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01278 195 704 WRKY Transcription Factor Family AT5G45050 22.323 1.52e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01278 - - ahf:112772775 1437.17