Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01218 ATGAACATAATAATGGGCAGAACAAGTTGTTCTGTTTTTCTATCTCTTCTCATTCTATCATCTTTTGTGGCAGAAATTCATGGTAGTAACAACAAGCAAGTTCAAGCACTTAACAATCTTCATAAGTCCAAGTTTAGAGCAAGATCAAGATCATCATCATCATCATCATCTCAAGATGTTACACATAGGAGTGAATTTGAGGTTGAAGAGCTTCATAACTATGATGATGTCATTGATTCTCAAGAAGGACTTAAAGAGAAAGACAGGATTTTGAGGCTTCCAGGGCAACCCCAAGTGAAGTTTTCTCAGTATGGAGGCTATGTTACAGTTGACAAATCCAATGGTCGTGCCTTTTATTACTACTTTGTTGAAGCTCAAAATTCTAAGGATACATTGCCTCTTCTTCTTTGGCTCAATGGAGGTCCAGGGTGTTCATCTCTTGCCTATGGAGCAATGCAAGAACTTGGACCCTTCAGAGTAAATAGTGATGGCAAAACACTCTACAAAAATAGATATTCATGGAACTATGCTGCAAATGTTTTGTTCCTGGAATCACCTACTGGGGTAGGATTTTCTTACTCAAACACAACATCAGATTACAAGACAAATGGGGATAAGAAAACAGCAGCAGATAATTATTTGTTCTTGGTGAATTGGTTGGAAAGATTTCCTGAATACAAGAATAGAGAATTCTATATTTCTGGAGAGAGTTATGCTGGACATTATGTTCCTCAACTTGCACACACTATCCTTTACCATAATAAAAGGGCAAAAAGGACAATCATCAACCTCAAAGGAATATTGATTGGGAATGCAGTGATTAATGATGACACTGACAACAAAGGAATGTATGATTTTCTTGCTACCCATGCAATCATCTCAGACCAAACAGCATCTGATATTGAAAAATTTTGTGATTTCTCATCCTCAAAGACTACAAGTGAGTGTGATGATGCCTCTTATGAAGCTGACAAGAATATTTACTACATTGATTTATACAACATTTATGCTCCTGACTGCAAGAATAACAATCTCACTGCTTATCCTAAGAAACCTTCTATTGTGACTGATCCATGTAGTGAGAGTTATGTACATGCATATATGAATAGGGAAGATGTTCAAGAAGCACTCCATGCAAATGTCACTAAGCTCGTATATGATTGGGAGCTATGCAGCAATGTCATTGGAAGATGGGGTGATAGCTCCTCAACAGTCCTTCCCCTTTTACATGAATTCCTCAATAATAACCTTAGAGTTTGGATTTTTAGTGGTGACATAGATGGAAGGGTGCCAGTGACTTCAACCAAGTATTCCATTAAGAAGATGAACCTTCCCATCAAAACTAAATGGCATGCTTGGTTTGCCTATGGAGAGGTTGGTGGCTACACTGAAGTTTACAAAGGAGGCCTAACATTGGCTACAGTGAGAGGAGCAGGGCATCAAGTACCAAGTTACCAACCAGCAAGAGCTCTCTCTTTGATTATGCATTTCTTAAATGGCACCCCTCTTCCTGATACTAAAAGATATCAGTAG 1533 0.3829 MNIIMGRTSCSVFLSLLILSSFVAEIHGSNNKQVQALNNLHKSKFRARSRSSSSSSSQDVTHRSEFEVEELHNYDDVIDSQEGLKEKDRILRLPGQPQVKFSQYGGYVTVDKSNGRAFYYYFVEAQNSKDTLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLYKNRYSWNYAANVLFLESPTGVGFSYSNTTSDYKTNGDKKTAADNYLFLVNWLERFPEYKNREFYISGESYAGHYVPQLAHTILYHNKRAKRTIINLKGILIGNAVINDDTDNKGMYDFLATHAIISDQTASDIEKFCDFSSSKTTSECDDASYEADKNIYYIDLYNIYAPDCKNNNLTAYPKKPSIVTDPCSESYVHAYMNREDVQEALHANVTKLVYDWELCSNVIGRWGDSSSTVLPLLHEFLNNNLRVWIFSGDIDGRVPVTSTKYSIKKMNLPIKTKWHAWFAYGEVGGYTEVYKGGLTLATVRGAGHQVPSYQPARALSLIMHFLNGTPLPDTKRYQ 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01218 510 FunFam Carboxypeptidase 84 342 - -
Arst3g01218 510 ProSitePatterns Serine carboxypeptidases, serine active site. 233 240 IPR018202 GO:0004185
Arst3g01218 510 FunFam Carboxypeptidase 405 500 - -
Arst3g01218 510 SUPERFAMILY alpha/beta-Hydrolases 92 504 IPR029058 -
Arst3g01218 510 Gene3D - 405 500 - -
Arst3g01218 510 Gene3D alpha/beta hydrolase 84 342 IPR029058 -
Arst3g01218 510 Pfam Serine carboxypeptidase 94 500 IPR001563 GO:0004185|GO:0006508
Arst3g01218 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 219 244 IPR001563 GO:0004185|GO:0006508
Arst3g01218 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 470 483 IPR001563 GO:0004185|GO:0006508
Arst3g01218 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 193 IPR001563 GO:0004185|GO:0006508
Arst3g01218 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 182 IPR001563 GO:0004185|GO:0006508
Arst3g01218 510 ProSitePatterns Serine carboxypeptidases, histidine active site. 470 487 IPR033124 GO:0004185
Arst3g01218 510 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 91 487 IPR001563 GO:0004185|GO:0006508
Arst3g01218 510 Gene3D - 359 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01218 Arst-Chr3 9709270 9715313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01218 367 503 Calmodulin-binding Proteins AT2G22960 31.387 3.75e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01218 K16297 - gmx:100804815 733.791