Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01212 ATGGGGTACCTCAGTTTCTCTTGCAGAGCTGAATCCGCAGTTTCAACCTCCAATTCTCTCACACCATCACCTTCTTCTTCGTCTTCTTCCACCACCACCACCTCAAAGAAACAGAACAACAAAGAAAAAGAAAAACCCATCAAGATCCAACACTTCCATTACAGTGACCTTGAAGCTGCCACCAATGGCTTCTCAGAGCGCAAGCTTCTCGGCAAAGGAAGCCATGGTTATGTCTATAAAGCTGTTGTACGTGGCCGTCCTGTGGCAGTGAAAAGACCATCAAGACCCCATCATCCTAATTTACCTCCAAAACCATCGCCAATGGTTTCTTCTTCTTCTTCCTCTGCATCTGCACCAGAGTTCATCATCAGCAACAACGAGGTTGACAACGAGATCGATATCTTGTCCAAAATCCAGAGCCCGAGGCTGGTGAACCTGGTTGGCTTCACAAATGATTCACAGGACAGGCTTCTGGTTGTTGAGTTCATGAGCAATGGAACACTCTATGATGTTCTTCATTCTTCTTCTTCTAATAATAACAATAACAACAAGCTTCCGAATTGGGGAAGAAGGGTTCGTTTGGCATTGCAAACTGCAAAGGCAATTGATACCCTTCATTCATCAACACCACCTGTGATCCACAGAGATATTAAATCAGCAAATGTTCTGATTGATAGAAACTTCAATGCAAGGTTAGGTGATTTTGGTTTGGCTCTTATGTGCCATGTTGATGATTATAGACTAAGGTCAACTCCACCAGCTGGCACAATGGGGTACCTTGATCCTTGTTATGTTACTCCTGATAATTTGAGCACTAAAAATGATGTCTTTAGTTTTGGGATTTTGTTGCTTGAGATTATTAGTGGAAGGAAAGCCATTGATGTAACATATTCACCACCTTCTATTGTGGATTGGGCCATTCCATTGATAAAGAAAGGGAAGCTTATGAGTGTTTATGATCCAAGGATTGCTCCTCCTAAGGATCCTATTGTGAGGAAGCAATTGGCTTTGATTGCTGCAAAGTGTGTTAGGAATTGTAGGGAGAGAAGGCCTTCCATGAGTGAGATTGTGAATTGGCTCAATGGTTTGTGTAAATTGGTTCCTCTTCATTCATGGAATGGTTTCAATAATCCTTGCATGATGGTTGAGACTATGGGAAGGCCAGTTGAAGCAGCAACAAGAAATGATTCTAATAATAATAATGAGAAAGACAAAATGAGTTCAAGATTGGAACTTGATTTCTTGGATGAGAGGTTGTCTAAATCTGCAATGAGGTATTCAAGGAGGGTCTATTCTGATTTGGGATTTAGTAGTAACTTGATGGATCTTATGGCTACAACTGAGGAGCCTGAGTTTCTAAGAGATGCTGATGGTAATGGTAATGGTAATGGTGCTTTGGAGCATAGTTCAAGTTGTAAATCTGCTGAACAAGTTTCTTCTTCAAGCTCAAGGTTTGGAAGTGGAAGGTATTTCACAAAAGGAAGAAACTTTTATAAGCCTTGTGGTACTTATAAGGATGTATTGGATTTGAGTAAAGGTCAAATTGTTGTTGGTAATGGTGGTGATGATAATGGTGCTTCTTGTTCTAATTTGAATTCTCTTGCTGCTGAGGCTGTTTAG 1620 0.4086 MGYLSFSCRAESAVSTSNSLTPSPSSSSSSTTTTSKKQNNKEKEKPIKIQHFHYSDLEAATNGFSERKLLGKGSHGYVYKAVVRGRPVAVKRPSRPHHPNLPPKPSPMVSSSSSSASAPEFIISNNEVDNEIDILSKIQSPRLVNLVGFTNDSQDRLLVVEFMSNGTLYDVLHSSSSNNNNNNKLPNWGRRVRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRNFNARLGDFGLALMCHVDDYRLRSTPPAGTMGYLDPCYVTPDNLSTKNDVFSFGILLLEIISGRKAIDVTYSPPSIVDWAIPLIKKGKLMSVYDPRIAPPKDPIVRKQLALIAAKCVRNCRERRPSMSEIVNWLNGLCKLVPLHSWNGFNNPCMMVETMGRPVEAATRNDSNNNNEKDKMSSRLELDFLDERLSKSAMRYSRRVYSDLGFSSNLMDLMATTEEPEFLRDADGNGNGNGALEHSSSCKSAEQVSSSSSRFGSGRYFTKGRNFYKPCGTYKDVLDLSKGQIVVGNGGDDNGASCSNLNSLAAEAV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01212 539 PANTHER OS01G0253100 PROTEIN 28 363 - -
Arst3g01212 539 MobiDBLite consensus disorder prediction 463 484 - -
Arst3g01212 539 SMART serkin_6 64 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01212 539 Gene3D Transferase(Phosphotransferase) domain 1 163 368 - -
Arst3g01212 539 MobiDBLite consensus disorder prediction 13 48 - -
Arst3g01212 539 ProSitePatterns Protein kinases ATP-binding region signature. 70 91 IPR017441 GO:0005524
Arst3g01212 539 SUPERFAMILY Protein kinase-like (PK-like) 47 372 IPR011009 -
Arst3g01212 539 MobiDBLite consensus disorder prediction 13 36 - -
Arst3g01212 539 Gene3D Phosphorylase Kinase; domain 1 33 162 - -
Arst3g01212 539 MobiDBLite consensus disorder prediction 88 115 - -
Arst3g01212 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Arst3g01212 539 MobiDBLite consensus disorder prediction 457 484 - -
Arst3g01212 539 FunFam Serine/threonine-protein kinase-like protein 163 373 - -
Arst3g01212 539 Pfam Protein kinase domain 65 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g01212 539 ProSiteProfiles Protein kinase domain profile. 64 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01212 Arst-Chr3 9620016 9621950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01212 23 361 Receptor kinase-like Gene Family AT3G59420 40.922 1.96e-72 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Arst3g01212 Pkinase 1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01212 - - gmx:100819674 706.827