Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01178 ATGAAGAAGAGTTGGTTCAGCCTTGTGAAGAGGCTCTTCATATGGGACTCAAATTCCACACAAGACAAGAACAAGGAGAAGAGAAGGAGATGGGTATTTGGAAGGGTAAAGAAGAAGAGGTTGCCTTCAATTGCAGCCCCACCACCACCACCACCAACAACAACAACAACAGCAACACTTGTGAGTGAAGCAGAGGAAGAAGAGAGCAAGAAACATGCTTTAACAGTGGCCATTGCCTCAGCTGCTGCTGCTGCTGCTGCTGCTGAGGTTGTAAGGCTCACTGGGGTCCCACAATCTTCCCACAAACCTAAACATAATTCAGAAGAATCTGATGAAACTAGGGATGTTGCTTCTCATTCCATAAGCCAGTGCCAGAGGAATAATATCAAAGAATTTGCAGCCATCAAAATTCAAACTGCATTTAGGGGTTACTTGGCTAAGAAGGCTTTGAGAGCATTAAAGGGAATAGTAAAGCTTCAAGCCATAATTCGTGGCCGAGCAGTAAGGCGCCAAGCCATGAGTACTTTGAAGTGCTTGCAATCCATTGTGAGTATCCAGTCACAGGTCTGTGCAAGAAGACTCAAAATGGTTGAAGGAAGCTGGGATTATTGCACTGAAAATGAAGAGATGCATGATTCAAAAGACAAGATAATAAGGATGGACTCAAACAGTGAAAGAAAGTGGAGTGACATCACCTTATTGAAGGAAGAGGTAGATGCCTCTTGCATAATCAAGAAAGAAGCAGTTCATAAGAGAGAAAGAATAAAAGAATACTCATTTAATCACAGAAGGTCAGCAGAATCAGAAAGAAGTAAAGTGAATGGAAGATGGAGGTACTGGCTGGAACAATGGGTGGATACACAGCTTTCAAAGAGCAAAGAGCTTGAAGATTTAGACTCAGTTTACAGCTCAAATTCAAGAGGTGGTGAAGAATATTATGGAGGAAGACAACTTAAGCTGAGAAACATGCATAGACAACAAAGTCCATTTGAAGGTTTAGATTCTCCAATAGTTTCTTCAAGAAAAGCTTTTACTCATAGGAAGCAGTGTTCAGTGGGAGAAAACCAATCATTCTCAAGCTCTTCTCCGGCGACTCCGGCATACATGGCTGCAACAGAATCAGCAAGAGCAAAAGCAAGATCAACAAGCTCCCCAAGAGTAAGGACAGGTCATTTGGACAGTGATAGTAGCTATTCACCATGCAAGAAGAAGCTATCTGTTGTGTCTAATGTTAACAGTGAAGTGCTTAGTAATAATGGTAGAAATGGCAACAAGTTCGGTGGTTGTAATCAACAAAGGTCACCAAGCTTTAAGGGACTTCCATTGCCTATAAAATCAAGCAGGACTATCATAAAGGATCTCAGCATTAATTCAGATTGCTCACTGCCCAATTGGGATAATAGACAAAGTTCCTTTAAATGA 1422 0.4163 MKKSWFSLVKRLFIWDSNSTQDKNKEKRRRWVFGRVKKKRLPSIAAPPPPPPTTTTTATLVSEAEEEESKKHALTVAIASAAAAAAAAEVVRLTGVPQSSHKPKHNSEESDETRDVASHSISQCQRNNIKEFAAIKIQTAFRGYLAKKALRALKGIVKLQAIIRGRAVRRQAMSTLKCLQSIVSIQSQVCARRLKMVEGSWDYCTENEEMHDSKDKIIRMDSNSERKWSDITLLKEEVDASCIIKKEAVHKRERIKEYSFNHRRSAESERSKVNGRWRYWLEQWVDTQLSKSKELEDLDSVYSSNSRGGEEYYGGRQLKLRNMHRQQSPFEGLDSPIVSSRKAFTHRKQCSVGENQSFSSSSPATPAYMAATESARAKARSTSSPRVRTGHLDSDSSYSPCKKKLSVVSNVNSEVLSNNGRNGNKFGGCNQQRSPSFKGLPLPIKSSRTIIKDLSINSDCSLPNWDNRQSSFK 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01178 473 ProSiteProfiles IQ motif profile. 154 181 IPR000048 GO:0005515
Arst3g01178 473 PANTHER IQ-DOMAIN 5-RELATED 1 408 - -
Arst3g01178 473 MobiDBLite consensus disorder prediction 414 437 - -
Arst3g01178 473 MobiDBLite consensus disorder prediction 376 398 - -
Arst3g01178 473 MobiDBLite consensus disorder prediction 94 121 - -
Arst3g01178 473 MobiDBLite consensus disorder prediction 349 398 - -
Arst3g01178 473 Pfam Protein of unknown function (DUF4005) 354 421 IPR025064 -
Arst3g01178 473 MobiDBLite consensus disorder prediction 102 116 - -
Arst3g01178 473 MobiDBLite consensus disorder prediction 349 368 - -
Arst3g01178 473 FunFam IQ-domain 11 129 180 - -
Arst3g01178 473 MobiDBLite consensus disorder prediction 414 441 - -
Arst3g01178 473 Pfam IQ calmodulin-binding motif 133 151 IPR000048 GO:0005515
Arst3g01178 473 Gene3D - 130 181 - -
Arst3g01178 473 ProSiteProfiles IQ motif profile. 130 158 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01178 Arst-Chr3 9149960 9152592 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01178 2 473 IQD Protein Family AT5G13460 44.856 2.26e-107 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01178 - - ahf:112789375 856.67