Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01174 ATGGACTCAGGTTCACCATACCAATGGATAAGGGAGCTGAGATTTGAAGACAGCAACACCTTAAATCCATTTGATCTTCTTTACGAATGTGCCAAATTTGTTGCATCAGGAAGCATAAAAAATGCAGACATAGCACTTGAATACATCTCTCACCAGTTGTCTCCGGACGGCGCAGCAGCGCAGCGCACGGTGACTTATTTCAGCGAAGCTCTGGCTTCCAAGATAGTCAAGAATCTTCCAGGAGTAGACAAAGCTCTAAACTCCTCAAAGAGATTAACTGCTCCTGAAGAAATCCTTGTCCAGAACTACTTCTATGAGTTGTTTCCTTTTCTGAAATGTGCTTACTTGACTGCAAATCAAGTCATAGTTAAAGCGATGGAAGGCGAAAAAATTGTCCATATAATTGATCTGCATTGTGCAGAGCCGGTTCAATGGATTAACCTCTTGATGACATTGAATGAGCGTCCTGAAGGACCTCCTCATTTGAGGATCACAAGCATTCATGATAAGAAAGAGGTTTTAGATCAGATGAATGCTAGTTTGACAAGAGAAGCAGAGAAATTGGATTTTCCTTTGCAGTTCAATCCTATAGTTAGCACTTTAGAAGACCTTGACATTGATAGTTTGCCGGTTCGCACAGGCGAGGCGCTTGCAATTTGTTCTGTCTTGCAGCTGCATCGCCTTCTAGCCACAGATGATGAAGTTCTAGGGAGGAATTCCCCGGCTGCAACGATGAATCTGCATAGAGCAGTGCATATGAACCGAAGAACTTTCGCAGAGTGGCTCGAAAGAGATATGATGAATTCATATATTTCAAGTCCTATCTCTGCTTTGTCACCTCCTCCTCTGTATCCTTCACCTAAGATGGAGGCATTTTTAAGAGATCTTCGCAAACTGCAGCCAAAATTAATGGTGATAACTGAGCAAGAGACTAATCTTAATGGATGCAGTCTTGTGGAGAGAGTTGAGAAAGCTTTATACTTCTACAGTGCCTTGTTTGATTGCTTGGATTCGACCGTGCGAAGAACTTCCTTGGAGAGGAAGAAAGTTGAGAGTTTGCTGCTTGGAGAGCAGATAAAGAACATCATTGCATCTGAGGGGTTTGAGAGAAAGGAGAGGTATGAGAAGCTTGAGAATTGGATTCGGCGGCTCGATCTGGCCGGTTTTGTGAGGCTGCCTTTGAGAGACAATGATAACTTGCATGCTAAGGAGGTTTTGCACAACTATGGACACAAATATATGATTAGAGAAGGCCATGGTTGCTTACTTGTTTGTTGGGGTGATAGACCCCTTTTCTCCATTTCAGCATGGAGTTTTAGAGGATTAAATCTTTCTTTATAA 1341 0.4258 MDSGSPYQWIRELRFEDSNTLNPFDLLYECAKFVASGSIKNADIALEYISHQLSPDGAAAQRTVTYFSEALASKIVKNLPGVDKALNSSKRLTAPEEILVQNYFYELFPFLKCAYLTANQVIVKAMEGEKIVHIIDLHCAEPVQWINLLMTLNERPEGPPHLRITSIHDKKEVLDQMNASLTREAEKLDFPLQFNPIVSTLEDLDIDSLPVRTGEALAICSVLQLHRLLATDDEVLGRNSPAATMNLHRAVHMNRRTFAEWLERDMMNSYISSPISALSPPPLYPSPKMEAFLRDLRKLQPKLMVITEQETNLNGCSLVERVEKALYFYSALFDCLDSTVRRTSLERKKVESLLLGEQIKNIIASEGFERKERYEKLENWIRRLDLAGFVRLPLRDNDNLHAKEVLHNYGHKYMIREGHGCLLVCWGDRPLFSISAWSFRGLNLSL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01174 446 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 433 IPR005202 -
Arst3g01174 446 Pfam GRAS domain family 25 437 IPR005202 -
Arst3g01174 446 ProSiteProfiles GRAS family profile. 14 438 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01174 Arst-Chr3 9121639 9123579 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01174 1 440 GRAS Transcription Factor Family AT1G50420 49.556 7.64e-147 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Arst3g01174 GRAS 6.4e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01174 - - gmx:100779726 585.104